Namespaces
namespace	epilogue
namespace	pputil
namespace	profiler
	Simple interface to Score-P for profiling ORB5.
namespace	QuadtreeConstants
namespace	readinput
namespace	spclibs

Classes
class	AntennaModule
	Builds and advances the externally imposed antenna potential. More...
struct	AntennaVariables
	Spectral and radial definition of an externally imposed field antenna. More...
class	BackgroundModule
	Initializes equilibrium distribution functions used by marker loading and pushing. More...
struct	BasicVariables
	Top-level run control shared by initialization and the time loop. More...
struct	BcpartReducer
class	BSpline
struct	BSplineEval
struct	BSplineEval3D
class	BSplinesBasis
	B-spline basis module for the solver. More...
struct	BumpontailFeq
	Parameters of the energetic-particle bump-on-tail distribution. More...
struct	CdtFeq
	Parameters of the experimental Claudio Di Troya equilibrium distribution. More...
class	CollisionsModule
struct	CollisionsVariables
	Grid and cadence shared by the selected Monte-Carlo collision model. More...
class	ComIsland
	Common island arrays for magnetic island physics. More...
struct	ContiEq
class	ControlAll
struct	CountLeavingMarkersFunctor
struct	Diag3dParameters
class	DiagnosticBSpline
class	Diagnostics
struct	DiagnosticsVariables
	Derived work arrays used by distribution and moment diagnostics. More...
struct	DiagVariables
	User-selected diagnostic cadence, grids, windows, and run counters. More...
class	EfluidModule
	Electron fluid model (FLU-ORB). More...
class	Epilogue
	Coordinates collective run termination and resource teardown. More...
class	Equil
struct	EquilVariables
	Magnetic-equilibrium inputs and geometry-derived normalization data. More...
class	FFTWrapper
class	FieldsModule
struct	FieldsVariables
	Field mesh, Fourier filtering, and background-electric-field state. More...
struct	FieldType
struct	FilterSaw
	Toroidal-mode-dependent poloidal filters for sawtooth studies. More...
class	FourierFilter
	Fourier filter for field-aligned modes. More...
class	GyrodensityCorrect
	Placeholder interface for the finite-Larmor-radius density correction. More...
class	Gyropoints
	Generates equally spaced quadrature points on a marker gyro-orbit. More...
struct	InitializeGene
	Geometry of the GENE-compatible initial perturbation. More...
struct	InitializeLigka
	Mode numbers and envelope for the LIGKA-L5 perturbation initializer. More...
struct	InitializeSaw
	Radial support and analysis step for the SAW perturbation initializer. More...
struct	InitializeWeights
	Spectral envelope used to initialize a potential perturbation. More...
class	InterfaceSolverInOrb5
	Interface for solver integration in ORB5X. More...
class	IslandModule
	Magnetic island physics module. More...
struct	IslandsVariables
	Parameters for the prescribed helical magnetic-island perturbation. More...
class	LarmorModule
struct	MarkerType
class	MassMatrix
	Constructs small element-local B-spline overlap operators. More...
struct	MatArray
class	MathUtil
struct	MatPropertyTemplate
class	MatrixCoeff
class	Moments
struct	Moments3DClass
struct	NoiseControlInt
struct	NoiseControlMatrix
struct	NumericalF0
	Tabulated numerical equilibrium distribution on (psi,u,ze). More...
struct	OhmEq
class	OneStep
	Executes one four-stage, operator-split gyrokinetic timestep. More...
struct	PackSendBufferFunctor
struct	PairHash
struct	ParallelVariables
	MPI topology, communicator ownership, and host-thread settings. More...
class	ParMove
class	PartFieldsModule
class	ParticleModule
struct	ParticleParallelFunctor
class	Pdespline
struct	PointerMarkers
struct	PointerMarkersI8
struct	PointerMarkersLogic
struct	PointerMarkersR4
struct	PointerQuadtree
class	Pputil
struct	PressEq
class	ProfilesWrapper
	Wrapper for profile and geometry functions used by solver. More...
class	ProfileUpdate
struct	PszsGrid
	One coordinate axis of a phase-space zonal-structure grid. More...
class	PszsModule
	PSZS Module - Phase Space Zone Sampling diagnostics. More...
struct	PszsVariables
	Per-species B-spline representation for PSZS diagnostics. More...
class	Quadtree
struct	QuadtreeBox
struct	QuadtreeSmooth
	Controls phase-space quadtree smoothing for one species. More...
class	RandomColl
class	RandomGenerator
class	ReadInput
struct	SlowingdownFeq
	Parameters and derived scales of slowing-down distributions. More...
class	SolverBoundaryConditions
	Applies the radial/poloidal boundary constraints used by field solves. More...
class	SolverModule
struct	SolverVariables
	Numerical and physical choices for quasineutrality and Ampere solves. More...
class	SortingClass
struct	SortingVariables
	Marker binning configuration for locality-oriented Kokkos sorting. More...
class	SourcesModule
struct	SpeciesVariables
	Complete physical, loading, source, and push state for one species. More...
struct	UnpackReceiveBufferFunctor
class	Util
class	Vis3d
struct	Zbmat

Typedefs
using	Complex = std::complex<Real>
	Complex simulation scalar with Real components.
using	CoordFunc = std::function<void(Real s, Real chi, Real& phi, Real& x, Real& y, Real& z)>
	3D visualization output module
using	fftw_complex_type = fftw_complex
using	fftw_plan_type = fftw_plan
using	FieldFunc = std::function<void(Real x, Real y, Real z, Real& field)>
using	Int4 = int32_t
	Signed integer type with exactly 32 bits.
using	Int8 = int64_t
	Signed integer type with exactly 64 bits, used for marker counts.
using	Real = double
	Default floating-point type for normalized physics and numerics.
using	Real32 = float
	Explicit IEEE-like single-precision storage type.
using	Real64 = double
	Explicit IEEE-like double-precision storage type.

Enumerations
enum class	CopyFields : int { PH1 = 0 , PH2 = 1 }
	Destination component for a split-potential field copy. More...
enum class	CreateRhs : int { PHI = 0 , APA = 1 }
	Field equation for which a right-hand side is assembled. More...
enum class	Diag3d : int { POT = 0 , DEN = 1 , MOMENT = 2 }
	Top-level family of three-dimensional diagnostics. More...
enum class	Diag3dDen : int { RHO = 0 , CURR = 1 }
	Deposited source written by the 3-D density diagnostic. More...
enum class	GetPotDisp : int { PHI = 0 , PH1 = 1 , PH2 = 2 , APA = 3 , ASY = 4 , RHO = 5 , RHM = 6 , CUR = 7 , EFN = 8 , EFP = 9 , EFU = 10 , AHA = 11 }
	Field or source quantity reconstructed by get_pot_disp diagnostics. More...
enum class	NSel3dDiag { DIAG_REAL = 0 , DIAG_RHS_F = 1 }
	Representation written by the single-field 3-D diagnostic. More...
enum class	NSelAmpere { ELECTROSTATIC = 0 , EM_GYROAPAR = 1 , EM_APAR = 2 }
	Electromagnetic content of the parallel Ampere solve. More...
enum class	NSelAntenna { ANT_OFF = 0 , ANT_RHO = 1 , ANT_JPAR = 2 , ANT_PHI = 3 , ANT_APAR = 4 }
	Field source driven by the numerical antenna. More...
enum class	NSelAntennaRadialProfile { ANT_POLYNOMIAL = 0 , ANT_SIN = 1 , ANT_GAUSS = 2 , ANT_INTERP = 3 }
	Radial envelope of the numerical antenna. More...
enum class	NSelBacksolve { PHI = 0 , MASS = 1 , APAR = 2 , MOM = 3 }
	Quantity reconstructed by a field backsolve. More...
enum class	NSelBeamType { X_MODE = 0 , O_MODE = 1 }
	Electromagnetic polarization of the ECRH beam. More...
enum class	NSelBsplinesBasis { BSPLINES_ORIGINAL = 0 , BSPLINES_DEBOOR = 1 }
	Implementation used to evaluate the B-spline basis. More...
enum class	NSelBufferType { NO_BUFFER = 0 , NAIVE_KROOK_BUFFER = 1 , KROOK_CONS_BUFFER = 2 , COLLISION_BUFFER = 3 }
	Outer radial buffer operator. More...
enum class	NSelCollisions { NO_COLL = 0 , SELF_COLL_L = 1 , MULTI_COLL_L = 2 , SELF_COLL_NL = 3 , MULTI_COLL_NL = 4 }
	Monte-Carlo collision operator. More...
enum class	NSelControlVariate { NO_CV = 0 , CORRECT_CURRENT = 1 }
	Current control-variate correction strategy. More...
enum class	NSelDftMethod { DFT_PPTRANSP = 0 , DFT_LOCAL = 1 }
	Toroidal discrete-Fourier-transform implementation. More...
enum class	NSelEfluid { NO_EFLUID = 0 , EFLUID_MHD = 1 , EFLUID_DEBUG = 2 }
	Electron-fluid closure model. More...
enum class	NSelElectronValues { ELECTRON_VALUES_ORB5 = 0 , ELECTRON_VALUES_LX_N = 1 , ELECTRON_VALUES_LX_BETA = 2 , ELECTRON_VALUES_T_N = 3 , ELECTRON_VALUES_T_BETA = 4 }
	Input quantities from which electron normalization is inferred. More...
enum class	NSelF0 { MAXWELLIAN = 0 , BUMPONTAIL = 1 , SLOWINGDOWN = 2 , CDT = 3 , CDTN = 4 , NUM_F0 = 5 , SLOWINGDOWN_BUMP = 6 , SLOWINGDOWN_PITCH = 7 , SLOWINGDOWN_PITCH_G_BREF = 8 , SLOWINGDOWN_PITCH_O = 9 , SLOWINGDOWN_PITCH_O_NOCHI = 10 , BUMPONTAIL_O = 11 , BUMPONTAIL_O_NOCHI = 12 , BUMPONTAIL_G_BREF = 13 }
	Equilibrium distribution function represented by a species. More...
enum class	NSelFilter { FILT_N = 0 , FILT_MN = 1 , FILT_MN_ONLY_FULL = 2 , FILT_SAW = 3 , FILT_MN_N0M0 = 4 }
	Angular Fourier-mode filtering policy. More...
enum class	NSelFixedSourceType { SOURCE_BASIC = 0 , SOURCE_ECRH = 1 }
	Fixed heating/source operator. More...
enum class	NSelFixFields { NO_FIX_FIELDS = 0 , FIX_FIELDS_S2 = 1 , FIX_FIELDS_SIN2_CHI = 2 , FIX_FIELDS_SIN2_PHI = 3 }
	Analytic test pattern used to replace evolved fields. More...
enum class	NSelGBref { G_B0 = 0 , G_BMIN = 1 , G_BMAX = 2 }
	Magnetic-field value used to normalize energetic distributions. More...
enum class	NSelGetField { GET_FIELD_BY_PART = 0 , GET_FIELD_BY_CELL = 1 }
	Grid-to-particle field-interpolation kernel organization. More...
enum class	NSelGradp { GRAD_POL = 0 , GRAD_POL_CORR = 1 }
	Pressure-gradient discretization. More...
enum class	NSelGyr { ADAPT = 0 , FIXED = 1 , DK = 2 , ADAPT_NAVG = 3 }
	Gyroaveraging-point selection strategy. More...
enum class	NSelHeatsourceRadial { RADIAL_CODE = 0 , RADIAL_FILE = 1 }
	Source of the radial heat-deposition profile. More...
enum class	NSelHybridModel { NO_HYBRID_MODEL = 0 , HYBRID_MODEL_UPGRADE = 1 , STANDARD_HYBRID_MODEL = 2 }
	Kinetic trapped/passing hybrid model. More...
enum class	NSelInitPert { PERT_NOISE = 0 , PERT_MODE_UNCORRECTED = 1 , PERT_MODE = 2 , PERT_MODE_TAE = 3 , PERT_MODE_SAW = 4 , PERT_D_COS = 5 , PERT_D_SIN = 6 , PERT_RH_COS = 7 , PERT_RH_SIN = 8 , PERT_RH_SIN_B = 9 , PERT_TANH_SIN = 10 , PERT_GENE = 11 , PERT_GENE_VPLL = 12 , PERT_POTENTIAL = 13 , PERT_RH_VPLL = 14 , PERT_COLL_II_1 = 15 , PERT_COLL_II_2 = 16 , PERT_COLL_II_3 = 17 , PERT_COLL_II_4 = 18 , PERT_SINGLEPART = 19 , PERT_LIGKA5 = 20 , PERT_LIGKA5_AUTO = 21 , PERT_GAUSS_LIST = 22 }
	Initial marker-weight or potential perturbation. More...
enum class	NSelInnerBc { NO_INNER_BC = 0 , DIRICHLET_INNER_BC = 1 , UNICITY_INNER_BC = 2 }
	Boundary condition at the magnetic axis. More...
enum class	NSelIonValues { ION_VALUES_ORB5 = 0 , ION_VALUES_TAU_FPART = 1 , ION_VALUES_TAU_N = 2 , ION_VALUES_T_N = 3 , ION_VALUES_T_FPART = 4 }
	Input quantities from which main-ion normalization is inferred. More...
enum class	NSelLoadphi { UNIFORM = 0 , HAMMERSLEY = 1 }
	Toroidal-angle marker-loading sequence. More...
enum class	NSelLoadSpace { SPACE_GAUSSIAN = 0 , SPACE_ALPHAB = 1 }
	Electron configuration-space loading density. More...
enum class	NSelLoadV { LOAD_V2 = 0 , LOAD_V3 = 1 , LOAD_V2_NO_T = 2 }
	Velocity-space marker-loading density. More...
enum class	NSelMatrixType { NSEL_GBMAT = 0 , NSEL_PBMAT = 1 }
enum class	NSelNoiseFilter { SHIFTED = 0 , ANTI_ALIGNED = 1 }
	Phase relation of the deposition noise-filter stencil. More...
enum class	NSelNormalizeDensity { ANNUAR = 0 , FULL = 1 , FREE = 2 , TAE = 3 }
	Volume convention used to normalize species density. More...
enum class	NSelPoisson { LWA = 0 , ARBITRARY = 1 , PADE = 2 }
	Gyrokinetic polarization model in quasineutrality. More...
enum class	NSelPotProfile { NO_POT = 0 , POT_BEN = 1 , POT_SHEAR = 2 , POT_PROF_FILE = 3 , POT_OGYROPSI = 4 , POT_JAMIE = 5 , POT_VPROF = 6 }
	Prescribed background-potential radial profile. More...
enum class	NSelProfile { TYPE_1 = 0 , TYPE_2 = 1 , TYPE_22 = 2 , TYPE_3 = 3 , TYPE_4 = 4 , INTERP_ITM = 5 , INTERP_TRANSP = 6 , TYPE_7 = 7 , TYPE_8 = 8 , TYPE_9 = 9 , TYPE_10 = 10 }
	Family of radial equilibrium density/temperature/flow profiles. More...
enum class	NSelPszs { PSZS_OFF = 0 , PSZS_ONLINE = 1 , PSZS_OFFLINE = 2 }
	Phase-space zonal-structure execution mode. More...
enum class	NSelPszsType { PSZS_W = 0 , PSZS_F0 = 1 }
	Distribution quantity projected by PSZS. More...
enum class	NSelPtransp { PTRANSP_SERIAL = 0 , PTRANSP_PARALLEL = 1 }
	Particle transport between toroidal spatial domains. More...
enum class	NSelPullback { NO_PULLBACK = 0 , PULLBACK_DA_DT_0 = 1 , PULLBACK_OHM = 2 }
	Electromagnetic pullback formulation. More...
enum class	NSelPush { PUSH_FULL = 0 , NO_PUSH = 1 , PUSH_UNPERT = 2 , PUSH_FULL_TEST = 3 , PUSH_UNPERT_TEST = 4 }
	Marker trajectory, weight, and deposition evolution mode. More...
enum class	NSelQProfile { INTERP = 0 , QUADRATIC = 1 , QCOEF = 2 }
	Source of the equilibrium safety-factor profile. More...
enum class	NSelQuasineutral { QN_FREE = 0 , QN_SET_NE = 1 , QN_SET_N1 = 2 , QN_SET_NL = 3 }
	Quasineutral-density closure imposed during normalization. More...
enum class	NSelSetrho { SETRHO_BY_PART = 0 , SETRHO_BY_CELL = 1 , SETRHO_BY_COLOR = 2 , SETRHO_BY_COLOR_BUF = 3 }
	Particle-to-grid charge-deposition kernel organization. More...
enum class	NSelSolve { POISSON = 0 , AMPERE = 1 , DENS1 = 2 , MOM = 3 }
	Field-system right-hand side/solve operation. More...
enum class	NSelSolverMatrixType { GBMAT = 0 , PBMAT = 1 }
	Storage format of the radial solver matrix. More...
enum class	NSelSortCache { SORT_CACHE_OFF = 0 , SORT_CACHE_ON = 1 }
	Guiding-centre sorting for memory locality. More...
enum class	NSelSourceDiagnostics { NC = 0 , HEATING = 1 , BUFFER = 2 }
	Source family represented by source-control diagnostics. More...
enum class	NSelStrong { STRONG_EXPECTED = 0 , STRONG_UE2_S2 = 1 , STRONG_UE2_SIN2_CHI = 2 , STRONG_UE2_S2_SIN2_CHI = 3 , STRONG_UEPHI_SIN2_CHI = 4 }
	Analytic strong-form test field. More...
enum class	NSelTestpart { NO_TESTPART = 0 , READ_TESTPART = 1 , FIRSTS_TESTPART = 2 }
	Test-particle initialization and selection policy. More...
enum class	NSelTilt { NO_TILT = 0 , RANDOM_TILT = 1 }
	Gyroangle rotation applied to gyroaveraging points. More...
enum class	NSelTimeIntegrator { RK4 = 0 , GL4 = 1 }
	Global time-integration scheme. More...
enum class	NSelVparallelI { MHD = 0 , ADHOC = 1 }
	Model used for the equilibrium ion parallel velocity. More...
enum class	NSelVparConstantInF0 { DH0 = 0 , DVPAR1 = 1 , NO_F0_CONSTANT = 2 , DH0_CORR = 3 , DVPAR1_CORR = 4 }
	Prescription for the parallel invariant used in df0/dt. More...
enum class	NSelWhichAttribute { CHARGE = 0 , CURRENT = 1 }
	Particle attribute deposited into a field right-hand side. More...
enum class	NSelWhichMat { T = 0 , T_TRANSP = 1 , T_INV = 2 }
	Algebraic transform requested from a solver matrix. More...
enum class	ParallelMomentum { P_PARALLEL = 0 , V_PARALLEL = 1 , MIXED = 2 }
	Parallel phase-space momentum coordinate. More...
enum class	ParallelMomentumType { P_PARALLEL = 0 , V_PARALLEL = 1 , MIXED = 2 }

Functions
void	allocate_matrix (int globalk, int matnum, int kl, int ku, int n)
void	backsolve_rhs_f (Kokkos::View< Complex * > &rhs_f, int globalk, int matnum)
void	bsolve (const Zbmat &mat, Complex *rhs, int nrhs=1)
void	bspl2fft_2d (const Kokkos::View< Real > &bspl_data, Kokkos::View< Complex > &fft_data, int nchi, int nphi)
void	bspl2fft_3d (const Kokkos::View< Real * > &bspl_data, Kokkos::View< Complex > &fft_data, int ns, int nchi, int nphi, int neq_f, const Kokkos::View< int *** > filter=nullptr, const Kokkos::View< Real > fftminv=nullptr, const Kokkos::View< int * > mmin_f=nullptr, const Kokkos::View< int * > *mmax_f=nullptr)
void	cleanup_globals ()
	Release modules and all Kokkos-owning global state.
void	defmat_disp ()
void	destroy_plan (fftw_plan plan)
void	execute_backward (fftw_plan plan)
void	execute_forward (fftw_plan plan)
void	factorize_matrix (Zbmat &mat, int nmat=-1, int matnum=-1, const char *context="")
void	fft2bspl_2d (const Kokkos::View< Complex > &fft_data, Kokkos::View< Real > &bspl_data, int nchi, int nphi)
void	fft2bspl_3d (const Kokkos::View< Complex > &fft_data, Kokkos::View< Real * > &bspl_data, int ns, int nchi, int nphi, int neq_f, const Kokkos::View< int ** > mmin_f=nullptr, const Kokkos::View< int * > *mmax_f=nullptr)
void	fftw_cleanup ()
Zbmat *	get_matrix (int globalk, int matnum)
constexpr Complex	IMA (0.0, 1.0)
	Imaginary unit used by Fourier-space operations.
void	init_1d_backward (int n, fftw_plan &plan_backward, fftw_complex in, fftw_complex out)
void	init_1d_forward (int n, fftw_plan &plan_forward, fftw_complex in, fftw_complex out)
void	init_2d_backward (int nchi, int nphi, fftw_plan &plan_backward, fftw_complex in, fftw_complex out)
void	init_2d_forward (int nchi, int nphi, fftw_plan &plan_forward, fftw_complex in, fftw_complex out)
void	init_globals ()
	Allocate process-wide state after Kokkos::initialize().
void	init_solver_data ()
void	interpos_smooth (const std::vector< Real > &xin, const std::vector< Real > &yin, std::vector< Real > &yout, std::vector< Real > &youtp)
void	printmat ()
void	set_global_variables ()
	Derive cached selectors, species ratios, and auxiliary dimensions.
void	setmat (bool lapl_boundary_terms)
void	updtmat (Zbmat &mat, int row, int col, Complex val)
void	vmx (const Zbmat &mat, const Kokkos::View< Complex * > &x, Kokkos::View< Complex * > &y)

Variables
constexpr int	ABSDF_DIA = 2
	Phase-space integral of absolute delta f.
constexpr int	ABSDF_IN_DIA = 10
	Absolute delta f inside the diagnostic volume.
constexpr int	ABSDF_OUT_DIA = 13
	Absolute delta f outside the diagnostic volume.
constexpr int	ABSG_DIA = 22
	Sum of absolute marker sampling distribution g.
constexpr int	ABSPWEIGHT_DIA = 17
	Sum of absolute second/background weights.
constexpr int	ALP_PIC = 2
	Marker loading/Jacobian factor alpha slot.
AntennaVariables *	antenna
	Externally imposed antenna configuration.
constexpr int	APA_2D_DIA = 2
	Global parallel-vector-potential spectrum.
constexpr int	APA_2D_LOC_DIA = 3
	Radially local parallel-vector-potential spectrum.
BasicVariables *	basic
	Run-control and top-level input state.
constexpr int	BUFFER_DENS_DIA = 8
	Buffer density contribution.
constexpr int	BUFFER_ENERGY_DIA = 9
	Buffer energy contribution.
constexpr int	BUFFER_VPLL_DIA = 11
	Buffer parallel-momentum contribution.
constexpr int	BUFFER_ZF_DIA = 10
	Buffer zonal-flow contribution.
constexpr int	CGRAINED_PIC = 6
	Coarse-grained marker-state flag slot.
constexpr int	CHI_DIA = 1
	Poloidal-angle displacement component.
constexpr int	CHI_PIC = 1
	Poloidal-angle slot in primary marker storage, radians.
constexpr int	cke = 0
	PSZS kinetic-energy coordinate slot.
constexpr Real	CLIGHT = 2.9979E8
	Speed of light in metres per second.
constexpr int	cmu = 2
	PSZS magnetic-moment coordinate slot.
CollisionsVariables *	collisions
	Collision-operator configuration.
constexpr int	ctam = 1
	PSZS toroidal-angular-momentum coordinate slot.
constexpr int	CUR_2D_DIA = 6
	Global parallel-current spectrum.
constexpr int	CUR_2D_LOC_DIA = 7
	Local parallel-current spectrum.
constexpr int	CURV_DIA = 3
	Magnetic-curvature drift contribution.
constexpr int	DENS_WT_PIC = 2
	Density-weight slot in deposition workspace.
constexpr int	DENSITY_LOSSES = 0
	Lost represented particle number.
constexpr int	DF_AV_2D_DIA = 0
	Two-dimensional average of delta f.
constexpr int	DF_VEL_2D_DIA = 1
	delta f on the two-dimensional velocity grid.
constexpr int	DFSUM_3_DIA = 5
	Cubic signed delta f sum.
constexpr int	DFSUM_4_DIA = 6
	Quartic delta f sum.
DiagVariables *	diag
	User-facing diagnostic configuration and counters.
DiagnosticsVariables *	diagnostics
	Derived diagnostic work arrays.
constexpr int	DN_PIC = 2
	Density increment slot.
constexpr int	DOTPZAPA_DIA = 7
	Time-derivative p_z A_parallel contribution.
constexpr int	DV2_PIC = 1
	Squared-speed/energy increment slot.
constexpr int	DVPAR_PIC = 0
	Parallel-momentum increment slot.
constexpr int	EBG_DIA = 5
	Background-electric-field contribution.
constexpr Real	ECHARGE = 1.6021765E-19
	Elementary charge magnitude in coulombs.
constexpr int	EF1_2D_DIA = 0
	Global first electric-field spectrum.
constexpr int	EF1_2D_LOC_DIA = 1
	Local first electric-field spectrum.
constexpr int	EF2_2D_DIA = 4
	Global second electric-field spectrum.
constexpr int	EF2_2D_LOC_DIA = 5
	Local second electric-field spectrum.
constexpr int	EFLUXF0H_DIA = 0
	f0 radial heat flux in helical cells.
constexpr int	EFLUXF0ISL_DIA = 0
	f0-weighted energy flux along perturbed magnetic field.
constexpr int	EFLUXF0ISLH_DIA = 2
	f0 heat flux along perturbed field in helical cells.
constexpr int	EFLUXWH_DIA = 1
	delta f radial heat flux in helical cells.
constexpr int	EFLUXWISL_DIA = 1
	delta f-weighted energy flux along perturbed magnetic field.
constexpr int	EFLUXWISLH_DIA = 3
	delta f heat flux along perturbed field in helical cells.
constexpr int	EKINF0_DIA = 9
	Equilibrium-distribution kinetic energy.
constexpr int	EKINF0_TR_DIA = 16
	Trapped-particle equilibrium kinetic energy.
constexpr int	ENERGY_LOSSES = 1
	Lost kinetic energy.
constexpr int	ENTROPY_DIA = 4
	Perturbed entropy measure.
constexpr int	ENTROPY_IN_DIA = 12
	Entropy inside the diagnostic volume.
constexpr int	ENTROPY_OUT_DIA = 15
	Entropy outside the diagnostic volume.
constexpr Real	EPSILONO = 8.8541878E-12
	Vacuum permittivity in farads per metre.
EquilVariables *	equil
	Magnetic-equilibrium and normalization state.
constexpr int	ETA_DIA = 4
	Second nonsingular axis-coordinate displacement.
constexpr int	ETRANSF0_DIA = 1
	Field-to-particle energy transfer weighted by f0.
constexpr int	ETRANSW_DIA = 0
	Field-to-particle energy transfer weighted by delta f.
constexpr Real	EULER = 0.5772156649015328606065120900824024310422
	Euler-Mascheroni constant.
constexpr int	EXB_DIA = 6
	ExB drift contribution.
constexpr int	EXBTOR_DIA = 5
	Toroidal ExB flow.
constexpr int	F_AV_2D_DIA = 2
	Distribution zeroth moment.
constexpr int	F_AVH_DIA = 7
	Helically binned distribution zeroth moment.
constexpr int	F_DIA = 3
	Distribution/density zeroth moment.
constexpr int	F_MS_DIA = 8
	Square of the mean distribution/density.
constexpr int	F_P_DIA = 9
	Passing-particle distribution zeroth moment.
constexpr int	F_TH_DIA = 3
	Poloidally binned distribution zeroth moment.
constexpr int	F_TR_DIA = 13
	Trapped-particle distribution zeroth moment.
constexpr int	F_VEL_2D_DIA = 2
	Total distribution on the velocity grid.
constexpr int	FFINIT_PIC = 3
	Initial equilibrium-distribution value slot.
constexpr int	FFINIT_PVOL_PIC = 0
	Initial f0 times marker phase volume.
constexpr int	FIELD_CORR_DIA = 3
	Corrected field contribution.
constexpr int	FIELD_DIA = 1
	Field contribution to fluctuation entropy.
FieldsVariables *	fields
	Field-grid, filtering, and model state.
FieldsModule *	fields_module
	Field deposition and solve service.
constexpr Real	FIXED_POINT_RTOL = 1.0E-15
	Relative tolerance for fixed-point iteration.
constexpr int	FLUID_1 = 0
	First electron-fluid moment slot.
constexpr int	FLUID_2 = 1
	Second electron-fluid moment slot.
constexpr int	FLUID_3 = 2
	Third electron-fluid moment slot.
constexpr int	FLUID_4 = 3
	Fourth electron-fluid moment slot.
constexpr int	FLUID_5 = 4
	Fifth electron-fluid moment slot.
constexpr int	FLUID_6 = 5
	Sixth electron-fluid moment slot.
constexpr int	FLUID_7 = 6
	Seventh electron-fluid moment slot.
constexpr int	FLUX_CORR_DIA = 4
	Corrected flux contribution.
constexpr int	FLUX_DIA = 2
	Flux contribution to fluctuation entropy.
constexpr int	FLUX_WT_PIC = 1
	Flux-weight slot in deposition workspace.
constexpr int	FR_DETRAP = 3
	Transition identifier for trapped-to-passing motion.
constexpr int	FR_PASS = 1
	Passing-orbit classification identifier.
constexpr int	FR_RETRAP = 4
	Transition identifier for passing-to-trapped motion.
constexpr int	FR_TRAP = 2
	Trapped-orbit classification identifier.
constexpr const char *	FRES = "orb5_res.h5"
	Main results filename.
constexpr const char *	FRES2 = "orb5_traj.h5"
	Test-particle trajectory filename.
extern::H5::H5File *	fresid
	Owning main-results handle, or nullptr.
extern::H5::H5File *	fresid2
	Owning trajectory-file handle, or nullptr.
constexpr int	FSELECT_APA = 3
	Select parallel vector potential A_parallel.
constexpr int	FSELECT_PHI = 1
	Select fluctuating electrostatic potential phi.
constexpr int	FSELECT_PHI0 = 2
	Select axisymmetric/background potential phi0.
constexpr int	FSIG_AV_DIA = 5
	Time-averaged distribution-function signal.
constexpr int	FSIG_DIA = 4
	Instantaneous distribution-function signal.
constexpr int	FU2_AV_2D_DIA = 4
	Parallel-velocity second moment.
constexpr int	FU_AV_2D_DIA = 3
	Parallel-velocity first moment.
constexpr int	FVP2_AV_2D_DIA = 5
	Perpendicular-speed second moment.
constexpr Real	GL4_A11 = 0.25
	Gauss-Legendre Butcher coefficient a11.
constexpr Real	GL4_A12 = -0.038675134594812866
	Gauss-Legendre Butcher coefficient a12.
constexpr Real	GL4_A21 = 0.53867513459481287
	Gauss-Legendre Butcher coefficient a21.
constexpr Real	GL4_A22 = 0.25
	Gauss-Legendre Butcher coefficient a22.
constexpr Real	GL4_C1 = 0.21132486540518713
	First node of two-stage fourth-order Gauss-Legendre integration.
constexpr Real	GL4_C2 = 0.78867513459481287
	Second Gauss-Legendre time node.
constexpr int	GRB_DIA = 2
	Grad-B drift contribution.
constexpr int	GRP_DIA = 4
	Pressure-gradient contribution.
constexpr int	GSUM_2_DIA = 24
	Second raw moment of g.
constexpr int	GSUM_3_DIA = 25
	Third raw moment of g.
constexpr int	GSUM_4_DIA = 26
	Fourth raw moment of g.
constexpr int	GSUM_DIA = 23
	First raw moment of marker sampling distribution g.
constexpr int	HEAT_DIA = 0
	Total radial heat flux.
constexpr int	HEAT_DIA_NEO = 3
	Neoclassical heat-flux component.
constexpr int	HEAT_P_DIA = 9
	Passing-particle heat flux.
constexpr int	HEAT_P_DIA_NEO = 13
	Neoclassical passing heat flux.
constexpr int	HEAT_TR_DIA = 10
	Trapped-particle heat flux.
constexpr int	HEAT_TR_DIA_NEO = 14
	Neoclassical trapped heat flux.
constexpr int	HEATING_DENS_DIA = 4
	Heating-source density contribution.
constexpr int	HEATING_ENERGY_DIA = 5
	Heating-source energy contribution.
constexpr int	HEATING_VPLL_DIA = 7
	Heating-source parallel-momentum contribution.
constexpr int	HEATING_ZF_DIA = 6
	Heating-source zonal-flow contribution.
constexpr int	ID_PIC = 0
	Globally persistent marker identifier slot.
constexpr int	ILARM_PIC = 1
	Offset of the first gyroaveraging point.
constexpr int	INNER_EDGE = 0
	Inner-radial-boundary loss slot.
constexpr const char *	INPUT_FILENAME = "input"
	Default namelist input filename.
IslandsVariables *	islands
	Prescribed magnetic-island configuration.
constexpr int	JBOOT_DIA = 6
	Bootstrap-current moment.
constexpr int	JDOTE_DIA = 13
	Species energy transfer j dot E.
constexpr Real	KBOLTZ = 1.3806E-23
	Boltzmann constant in joules per kelvin.
constexpr int	KSI_DIA = 3
	First nonsingular axis-coordinate displacement.
constexpr int	KSIETA_PIC = 0
	Low-discrepancy loading-state slot.
constexpr Real	LNLAM = 15.0
	Reference Coulomb logarithm, dimensionless.
constexpr int	LOSSES_MOMENTS = 3
	Number of tracked loss moments.
constexpr int	lu_dat = 99
	Legacy generic-data unit.
constexpr int	lu_datn = 32
	Legacy density-data unit.
constexpr int	lu_datv = 100
	Legacy velocity-data unit.
constexpr int	lu_debug = 13
	Legacy debug-log unit.
constexpr int	lu_denprofs = 89
	Legacy density-profile unit.
constexpr int	lu_f0 = 90
	Legacy numerical-f0 unit.
constexpr int	lu_fields = 96
	Legacy saved-field unit.
constexpr int	lu_input = 16
	Legacy Fortran unit reserved for namelist input.
constexpr int	lu_io = 14
	Legacy general I/O unit.
constexpr int	lu_kprofs = 88
	Legacy gradient-profile unit.
constexpr int	lu_noh5 = 63
	Legacy non-HDF5 output unit.
constexpr int	lu_optidat = 75
	Legacy optimized-loading data unit.
constexpr int	lu_p1 = 81
	Legacy first potential-component unit.
constexpr int	lu_p2 = 83
	Legacy second potential-component unit.
constexpr int	lu_profiles = 78
	Legacy equilibrium-profile unit.
constexpr int	lu_profs = 87
	Legacy species-profile unit.
constexpr int	lu_pszs = 36
	Legacy PSZS-output unit.
constexpr int	lu_res = 34
	Legacy results unit.
constexpr int	lu_restime = 35
	Legacy restart-timing unit.
constexpr int	lu_stop = 31
	Legacy stop/status-file unit.
constexpr int	lu_test = 33
	Legacy test-output unit.
constexpr int	lu_testpart = 77
	Legacy test-particle input unit.
constexpr int	lu_tkdat = 97
	Legacy toolkit-data unit.
constexpr int	lu_tklog = 98
	Legacy toolkit-log unit.
constexpr int	lu_traj = 95
	Legacy trajectory-output unit.
constexpr int	lu_version = 15
	Legacy version-file unit.
MatArray	MATS
constexpr int	MAX_PIC2_C = 7
	Auxiliary marker reals with coarse-graining extras.
constexpr int	MAX_PIC2_NC = 5
	Auxiliary marker reals without coarse-graining extras.
constexpr int	MAX_PIC3 = 2
	Integer/flag values in tertiary marker storage.
constexpr int	MAX_PIC4 = 1
	64-bit integer values stored per marker.
constexpr int	MAX_WORK_C = 6
	Primary marker reals with the second weight.
constexpr int	MAX_WORK_NC = 5
	Primary marker reals without the second weight.
constexpr Real	MEMKSA = 9.1094E-31
	Electron mass in kilograms.
constexpr Real	MIMKSA = 1.6726231E-27
	Reference proton/ion mass in kilograms.
constexpr int	moments_3d_size = 8
	Number of standard 3-D moments.
constexpr int	MOMENTUM_DIA = 2
	Total radial parallel-momentum flux.
constexpr int	MOMENTUM_DIA_NEO = 5
	Neoclassical momentum-flux component.
constexpr int	MPR_2D_ID_JDOTE_ES = 0
	Electrostatic j dot E transfer.
constexpr int	MPR_2D_ID_JDOTE_ES_S1 = 1
	Electrostatic j dot E in the selected radial interval.
constexpr int	MPR_2D_SIZE = 2
	Number of mode-particle-resonance 2-D quantities.
constexpr Real	MU0 = 4.0 * PI * 1e-7
	Vacuum permeability in henries per metre.
constexpr int	MU_PIC = 0
	Normalized magnetic-moment slot in auxiliary storage.
constexpr int	N_DF_AV_2D_DIA = 1
	Marker-count-weighted average of delta f.
constexpr int	N_VEL_2D_DIA = 0
	Marker count on the two-dimensional velocity grid.
constexpr int	NBIN_EN = 32
	Default heating energy bins.
constexpr int	NBIN_LAM = 64
	Default electron pitch lambda bins.
constexpr int	NBIN_MU = 128
	Magnetic-moment bins for bounce-averaged v_parallel/B.
constexpr int	NBIN_PSI0 = 64
	Flux bins for bounce-averaged v_parallel/B.
constexpr int	NBIN_R = 64
	Default heating radial bins.
constexpr int	NBIN_S = 32
	Default electron radial bins.
constexpr int	NBIN_THETA = 64
	Default electron poloidal-angle bins.
constexpr int	NBIN_XI = 64
	Default electron pitch-cosine xi bins.
constexpr int	NCONTROL_DENS_DIA = 0
	Noise-control density correction.
constexpr int	NCONTROL_ENERGY_DIA = 1
	Noise-control energy correction.
constexpr int	NCONTROL_VPLL_DIA = 3
	Noise-control parallel-momentum correction.
constexpr int	NCONTROL_ZF_DIA = 2
	Noise-control zonal-flow correction.
constexpr int	ndump = 12
	Legacy unit for formatted restart dumps.
constexpr int	ndump_bin_a = 11
	Legacy unit for binary array dumps.
constexpr int	ndump_bin_p = 10
	Legacy unit for binary particle dumps.
constexpr int	NLARM_PIC = 0
	Number of gyroaveraging points in Larmor metadata.
constexpr int	NOISE_AV_DIA = 7
	Time-averaged particle-noise estimator.
constexpr int	NOISE_DIA = 6
	Instantaneous particle-noise estimator.
constexpr Int8	NPTOT_PRE = 100000000
	Samples used by adiabatic-density precomputation.
constexpr int	NUMBER_SOURCE_DIAG = 12
	Number of one-dimensional source diagnostics.
constexpr int	NXI = 8
	Helical-angle bins in magnetic-island diagnostics.
constexpr int	OMP_ZERO = 0
	Zero offset used by OpenMP-compatible indexing paths.
constexpr int	OUTER_EDGE = 1
	Outer-radial-boundary loss slot.
constexpr int	P_PIC = 5
	Background/second-weight slot when two weights are enabled.
constexpr int	PAR_DIA = 1
	Parallel-electric-field contribution.
constexpr const char *	PARAFRES = "orb5_res_parallel.h5"
	Parallel results filename.
extern::H5::H5File *	parafresid
	Owning parallel-results handle, or nullptr.
ParallelVariables *	parallel
	MPI topology and host-thread state.
ParMove *	parmove_module
	Toroidal particle-exchange service.
PartFieldsModule *	part_fields_module
	Marker-to-field interpolation service.
constexpr int	PARTICLE_DIA = 1
	Total radial particle flux.
constexpr int	PARTICLE_DIA_NEO = 4
	Neoclassical particle-flux component.
ParticleModule *	particle_module
	Marker loading and push service.
constexpr int	PARTICLE_P_DIA = 11
	Passing-particle particle flux.
constexpr int	PARTICLE_P_DIA_NEO = 15
	Neoclassical passing particle flux.
constexpr int	PARTICLE_TR_DIA = 12
	Trapped-particle particle flux.
constexpr int	PARTICLE_TR_DIA_NEO = 16
	Neoclassical trapped particle flux.
constexpr int	PARTQUANTS_NUMELS = 20
	Marker quantities written per test-particle record.
constexpr int	PEKIN_DIA = 7
	Marker-weighted kinetic energy.
constexpr int	PHASE_DF_DIA = 3
	Binned delta f.
constexpr int	PHASE_F0_DIA = 5
	Binned equilibrium distribution.
constexpr int	PHASE_NUMPART_DIA = 0
	Marker count in each phase-space bin.
constexpr int	PHASE_P_DIA = 4
	Background/second-weight sum.
constexpr int	PHASE_PVOL_DIA = 1
	Phase-space-volume sum.
constexpr int	PHASE_W2_DIA = 6
	Squared perturbation-weight sum.
constexpr int	PHASE_W_DIA = 2
	Perturbation-weight sum.
constexpr int	PHI_2D_DIA = 0
	Global electrostatic-potential spectrum.
constexpr int	PHI_2D_LOC_DIA = 1
	Radially local electrostatic-potential spectrum.
constexpr int	PHI_DIA = 2
	Toroidal-angle displacement component.
constexpr int	PHI_PIC = 2
	Toroidal-angle slot in primary marker storage, radians.
constexpr Real	PI = 3.141592653589793238462643383279502884197
	Circle constant pi.
constexpr Real	PIO2 = 1.57079632679489661923132169163975144209858
	Half pi, radians.
constexpr int	PNUMB_DIA = 3
	Total represented particle number.
constexpr int	PNUMB_IN_DIA = 11
	Particle number inside the diagnostic volume.
constexpr int	PNUMB_OUT_DIA = 14
	Particle number outside the diagnostic volume.
constexpr int	POLARISATION_TERM_DIVP0 = 9
	Divergence of equilibrium polarization P0.
constexpr int	POLARISATION_TERM_DIVQ0 = 10
	Divergence of equilibrium polarization flux Q0.
constexpr int	POLARISATION_TERM_P0 = 11
	Equilibrium polarization P0 term.
constexpr int	POLARISATION_TERM_Q0 = 12
	Equilibrium polarization flux Q0 term.
constexpr int	POLPROD_DIA = 5
	Polarization-product moment.
constexpr int	PSI0CORR_PIC = 4
	Corrected invariant-flux coordinate slot.
std::vector< PszsVariables > *	pszs
	Per-species phase-space zonal-structure state.
constexpr int	PULLBACK_DIA = 8
	Pullback-transformation contribution.
constexpr int	PVOL_PIC = 1
	Marker phase-space-volume slot.
constexpr int	PWEIGHTSUM_2_DIA = 19
	Second raw moment of the second weight.
constexpr int	PWEIGHTSUM_3_DIA = 20
	Third raw moment of the second weight.
constexpr int	PWEIGHTSUM_4_DIA = 21
	Fourth raw moment of the second weight.
constexpr int	PWEIGHTSUM_DIA = 18
	First raw moment of the second weight.
constexpr int	QP_DIA = 4
	Parallel heat-flux moment.
constexpr int	REV_ALP = 6
	Bit-reversed sequence for loading factor alpha.
constexpr int	REV_ETA = 1
	Bit-reversed sequence for the second spatial coordinate.
constexpr int	REV_KSI = 0
	Bit-reversed sequence for the first spatial coordinate.
constexpr int	REV_V1 = 2
	Bit-reversed sequence for the first velocity coordinate.
constexpr int	REV_V2 = 3
	Bit-reversed sequence for the second velocity coordinate.
constexpr int	REV_V3 = 5
	Bit-reversed sequence for the third velocity coordinate.
constexpr int	REV_W = 4
	Bit-reversed sequence for marker weights.
constexpr int	RHO_2D_DIA = 2
	Global charge-density spectrum.
constexpr int	RHO_2D_LOC_DIA = 3
	Local charge-density spectrum.
constexpr int	RHOG_PIC = 2
	Normalized gyroradius in Larmor metadata.
constexpr int	S_DIA = 0
	Radial displacement component.
constexpr int	S_PIC = 0
	Radial-coordinate slot in primary marker storage.
constexpr int	S_PROD_DIA = 0
	Entropy-production term.
constexpr int	SAMP_DF_DIA = 3
	Sampled delta f.
constexpr int	SAMP_F0_DIA = 5
	Sampled equilibrium distribution.
constexpr int	SAMP_NUMPART_DIA = 0
	Marker count in each sampling bin.
constexpr int	SAMP_P_DIA = 4
	Summed background/second weight.
constexpr int	SAMP_PVOL_DIA = 1
	Summed marker phase-space volume.
constexpr int	SAMP_W2_DIA = 6
	Summed squared perturbation weight.
constexpr int	SAMP_W_DIA = 2
	Summed perturbation weight.
constexpr int	SIGNAL_AV_DIA = 1
	Time-averaged total signal estimator.
constexpr int	SIGNAL_DIA = 0
	Instantaneous total signal estimator.
constexpr int	SIGNAL_NONZONAL_AV_DIA = 3
	Time-averaged nonzonal signal estimator.
constexpr int	SIGNAL_NONZONAL_DIA = 2
	Instantaneous nonzonal signal estimator.
constexpr Real	slope_line = 0.0
	Slope of the optimized-loading weight-limit line.
SolverVariables *	solver
	Quasineutrality and Ampere solver configuration.
SortingVariables *	sorting
	Particle binning and sorting configuration.
constexpr int	SOURCE_3D_DN_DIA = 1
	Three-dimensional source density rate.
constexpr int	SOURCE_3D_POWER_DIA = 0
	Three-dimensional deposited source power.
std::vector< SpeciesVariables > *	species
	Per-species physical and numerical state.
constexpr Real	SQRT2 = 1.41421356237309504880168872420969807856967
	Square root of two.
constexpr int	SUMF0_DIA = 8
	Marker sum of equilibrium distribution.
constexpr Real	T2GAUSS = 1.e4
	Number of gauss per tesla.
constexpr Real	thresh = 23.0
	Threshold parameter of optimized marker loading.
constexpr int	TMP_PHI_PIC = 5
	Temporary toroidal coordinate used by coarse graining.
constexpr int	TOR_MOMENTUM_DIA = 6
	Toroidal-momentum flux.
constexpr int	TOR_MOMENTUM_DIA_NEO = 7
	Neoclassical toroidal-momentum flux.
constexpr int	TOR_REYNOLDS_DIA = 8
	Toroidal Reynolds-stress contribution.
constexpr int	TOT_DIA = 0
	Total j dot E energy transfer.
constexpr int	TRAP_PIC = 1
	Trapped/passing classification slot.
constexpr Real	TWOPI = 6.283185307179586476925286766559005768394
	Full angular period, radians.
constexpr int	U_DIA = 5
	Parallel-velocity displacement component.
constexpr int	U_PIC = 3
	Normalized parallel-velocity slot.
constexpr int	UT2_DIA = 1
	Parallel-velocity second moment.
constexpr int	UT2_P_DIA = 7
	Passing-particle parallel-velocity second moment.
constexpr int	UT2_TR_DIA = 11
	Trapped-particle parallel-velocity second moment.
constexpr int	UT_DIA = 0
	Parallel-velocity first moment.
constexpr int	UT_MS_DIA = 7
	Square of the mean parallel velocity.
constexpr int	UT_P_DIA = 6
	Passing-particle parallel-velocity first moment.
constexpr int	UT_TR_DIA = 10
	Trapped-particle parallel-velocity first moment.
constexpr int	UW_PIC = 3
	Parallel-velocity-times-weight workspace slot.
constexpr int	V_PAR2_AVH_DIA = 5
	Helically binned parallel-velocity second moment.
constexpr int	V_PAR2_TH_DIA = 1
	Poloidally binned parallel-speed squared.
constexpr int	V_PAR_AVH_DIA = 4
	Helically binned parallel-velocity first moment.
constexpr int	V_PAR_TH_DIA = 0
	Poloidally binned parallel-velocity moment.
constexpr int	V_PERP2_AVH_DIA = 6
	Helically binned perpendicular-speed second moment.
constexpr int	V_PERP2_TH_DIA = 2
	Poloidally binned perpendicular-speed squared.
constexpr Real	vernum = 1.0
	Legacy numeric ORB5X file/version identifier.
constexpr int	VPLL_LOSSES = 2
	Lost parallel momentum.
constexpr int	VPLTOR_DIA = 4
	Toroidal projection of parallel flow.
constexpr int	VPT2_DIA = 2
	Perpendicular-speed second moment.
constexpr int	VPT2_P_DIA = 8
	Passing-particle perpendicular-speed second moment.
constexpr int	VPT2_TR_DIA = 12
	Trapped-particle perpendicular-speed second moment.
constexpr int	VPT_PIC = 1
	Normalized perpendicular-speed quantity.
constexpr int	W_AVERAGE = 0
	Mean marker weight.
constexpr int	W_DIA = 6
	Marker-weight displacement component.
constexpr int	W_PIC = 4
	Perturbed-distribution weight slot.
constexpr int	W_VARIANCE = 4
	Marker-weight variance.
constexpr int	WADI_AVERAGE = 2
	Mean adiabatic marker weight.
constexpr int	WADI_VARIANCE = 6
	Adiabatic-weight variance.
constexpr Real	wLimitFrac = 10.0
	Initial fractional marker-weight limit.
constexpr Real	wLimitFracLimit = 200.0
	Maximum fractional marker-weight limit.
constexpr int	WV_AVERAGE = 1
	Mean velocity-weighted marker weight.
constexpr int	WV_VARIANCE = 5
	Velocity-weighted marker-weight variance.
constexpr int	WVADI_AVERAGE = 3
	Mean velocity-weighted adiabatic weight.
constexpr int	WVADI_VARIANCE = 7
	Velocity-weighted adiabatic-weight variance.

Typedef Documentation

◆ Complex

using orb5x::Complex = std::complex<Real>

Complex simulation scalar with Real components.

◆ CoordFunc

using orb5x::CoordFunc = std::function<void(Real s, Real chi, Real& phi, Real& x, Real& y, Real& z)>

3D visualization output module

Output 3D arrays for visualization in HDF5-based formats (PIXIE and XDMF)

◆ fftw_complex_type

using orb5x::fftw_complex_type = fftw_complex

◆ fftw_plan_type

using orb5x::fftw_plan_type = fftw_plan

◆ FieldFunc

using orb5x::FieldFunc = std::function<void(Real x, Real y, Real z, Real& field)>

◆ Int4

using orb5x::Int4 = int32_t

Signed integer type with exactly 32 bits.

◆ Int8

using orb5x::Int8 = int64_t

Signed integer type with exactly 64 bits, used for marker counts.

◆ Real

using orb5x::Real = double

Default floating-point type for normalized physics and numerics.

◆ Real32

using orb5x::Real32 = float

Explicit IEEE-like single-precision storage type.

◆ Real64

using orb5x::Real64 = double

Explicit IEEE-like double-precision storage type.

Enumeration Type Documentation

◆ CopyFields

enum class orb5x::CopyFields : int

strong

Destination component for a split-potential field copy.

Enumerator
PH1	Copy to the first potential component.
PH2	Copy to the second potential component.

◆ CreateRhs

enum class orb5x::CreateRhs : int

strong

Field equation for which a right-hand side is assembled.

Enumerator
PHI	Assemble quasineutrality right-hand side.
APA	Assemble parallel-Ampere right-hand side.

◆ Diag3d

enum class orb5x::Diag3d : int

strong

Top-level family of three-dimensional diagnostics.

Enumerator
POT	Field potentials.
DEN	Deposited density/current.
MOMENT	Kinetic moments.

◆ Diag3dDen

enum class orb5x::Diag3dDen : int

strong

Deposited source written by the 3-D density diagnostic.

Enumerator
RHO	Charge density.
CURR	Parallel current density.

◆ GetPotDisp

enum class orb5x::GetPotDisp : int

strong

Field or source quantity reconstructed by get_pot_disp diagnostics.

Enumerator
PHI	Electrostatic potential.
PH1	First split potential component.
PH2	Second split potential component.
APA	Parallel vector potential.
ASY	Up-down asymmetric field component.
RHO	Charge density.
RHM	Subtracted/corrected charge density.
CUR	Parallel current density.
EFN	Normal electric-field component.
EFP	Parallel electric-field component.
EFU	Electric field along normalized velocity coordinate.
AHA	Parallel-vector-potential harmonic amplitude.

◆ NSel3dDiag

enum class orb5x::NSel3dDiag

strong

Representation written by the single-field 3-D diagnostic.

Enumerator
DIAG_REAL	Reconstructed real-space field.
DIAG_RHS_F	Field-equation right-hand side.

◆ NSelAmpere

enum class orb5x::NSelAmpere

strong

Electromagnetic content of the parallel Ampere solve.

Enumerator
ELECTROSTATIC	Disable A_parallel; electrostatic model.
EM_GYROAPAR	Solve gyroaveraged A_parallel.
EM_APAR	Solve non-gyroaveraged A_parallel.

◆ NSelAntenna

enum class orb5x::NSelAntenna

strong

Field source driven by the numerical antenna.

Enumerator
ANT_OFF	Disable antenna forcing.
ANT_RHO	Drive charge density.
ANT_JPAR	Drive parallel current.
ANT_PHI	Drive electrostatic potential.
ANT_APAR	Drive parallel vector potential.

◆ NSelAntennaRadialProfile

enum class orb5x::NSelAntennaRadialProfile

strong

Radial envelope of the numerical antenna.

Enumerator
ANT_POLYNOMIAL	Polynomial in normalized radius.
ANT_SIN	Sinusoidal radial envelope.
ANT_GAUSS	Gaussian radial envelope.
ANT_INTERP	Interpolate an envelope from file.

◆ NSelBacksolve

enum class orb5x::NSelBacksolve

strong

Quantity reconstructed by a field backsolve.

Enumerator
PHI	Electrostatic potential.
MASS	B-spline mass projection.
APAR	Parallel vector potential.
MOM	Moment coefficients.

◆ NSelBeamType

enum class orb5x::NSelBeamType

strong

Electromagnetic polarization of the ECRH beam.

Enumerator
X_MODE	Extraordinary-mode beam.
O_MODE	Ordinary-mode beam.

◆ NSelBsplinesBasis

enum class orb5x::NSelBsplinesBasis

strong

Implementation used to evaluate the B-spline basis.

Enumerator
BSPLINES_ORIGINAL	Legacy ORB5 basis recursion.
BSPLINES_DEBOOR	de Boor basis evaluation.

◆ NSelBufferType

enum class orb5x::NSelBufferType

strong

Outer radial buffer operator.

Enumerator
NO_BUFFER	Disable the outer buffer.
NAIVE_KROOK_BUFFER	Simple Krook relaxation.
KROOK_CONS_BUFFER	Density-conserving Krook relaxation.
COLLISION_BUFFER	Collisional buffer operator.

◆ NSelCollisions

enum class orb5x::NSelCollisions

strong

Monte-Carlo collision operator.

Enumerator
NO_COLL	Collisionless evolution.
SELF_COLL_L	Linearized same-species collisions.
MULTI_COLL_L	Linearized multispecies collisions.
SELF_COLL_NL	Nonlinear same-species collisions.
MULTI_COLL_NL	Nonlinear multispecies collisions.

◆ NSelControlVariate

enum class orb5x::NSelControlVariate

strong

Current control-variate correction strategy.

Enumerator
NO_CV	Disable control-variate correction.
CORRECT_CURRENT	Iteratively correct deposited parallel current.

◆ NSelDftMethod

enum class orb5x::NSelDftMethod

strong

Toroidal discrete-Fourier-transform implementation.

Enumerator
DFT_PPTRANSP	Use the distributed particle-transport transform.
DFT_LOCAL	Use a rank-local transform.

◆ NSelEfluid

enum class orb5x::NSelEfluid

strong

Electron-fluid closure model.

Enumerator
NO_EFLUID	Disable the electron-fluid closure.
EFLUID_MHD	Use the MHD electron-fluid closure.
EFLUID_DEBUG	Use diagnostic/debug closure equations.

◆ NSelElectronValues

enum class orb5x::NSelElectronValues

strong

Input quantities from which electron normalization is inferred.

Enumerator
ELECTRON_VALUES_ORB5	Preserve legacy ORB5 inference rules.
ELECTRON_VALUES_LX_N	Infer from box scale and density.
ELECTRON_VALUES_LX_BETA	Infer from box scale and beta.
ELECTRON_VALUES_T_N	Infer from temperature and density.
ELECTRON_VALUES_T_BETA	Infer from temperature and beta.

◆ NSelF0

enum class orb5x::NSelF0

strong

Equilibrium distribution function represented by a species.

Enumerator
MAXWELLIAN	Local/canonical Maxwellian.
BUMPONTAIL	Bump-on-tail energetic distribution.
SLOWINGDOWN	Isotropic slowing-down distribution.
CDT	Claudio Di Troya distribution.
CDTN	Normalized Claudio Di Troya variant.
NUM_F0	Tabulated numerical distribution.
SLOWINGDOWN_BUMP	Hybrid slowing-down/bump-on-tail distribution.
SLOWINGDOWN_PITCH	Pitch-anisotropic slowing-down distribution.
SLOWINGDOWN_PITCH_G_BREF	Pitch slowing-down with GYSELA reference field.
SLOWINGDOWN_PITCH_O	Legacy ORB5 pitch slowing-down form.
SLOWINGDOWN_PITCH_O_NOCHI	Legacy form without poloidal dependence.
BUMPONTAIL_O	Legacy ORB5 bump-on-tail form.
BUMPONTAIL_O_NOCHI	Legacy bump-on-tail without poloidal dependence.
BUMPONTAIL_G_BREF	Bump-on-tail with GYSELA reference field.

◆ NSelFilter

enum class orb5x::NSelFilter

strong

Angular Fourier-mode filtering policy.

Enumerator
FILT_N	Filter only toroidal modes.
FILT_MN	Filter both poloidal and toroidal modes.
FILT_MN_ONLY_FULL	Apply (m,n) filtering only to full fields.
FILT_SAW	Apply the sawtooth-specific mode lists.
FILT_MN_N0M0	Apply (m,n) filtering while retaining the (0,0) mode.

◆ NSelFixedSourceType

enum class orb5x::NSelFixedSourceType

strong

Fixed heating/source operator.

Enumerator
SOURCE_BASIC	Generic prescribed heat source.
SOURCE_ECRH	Electron-cyclotron-resonance heating source.

◆ NSelFixFields

enum class orb5x::NSelFixFields

strong

Analytic test pattern used to replace evolved fields.

Enumerator
NO_FIX_FIELDS	Use evolved fields.
FIX_FIELDS_S2	Replace with a quadratic radial pattern.
FIX_FIELDS_SIN2_CHI	Replace with a squared poloidal sine pattern.
FIX_FIELDS_SIN2_PHI	Replace with a squared toroidal sine pattern.

◆ NSelGBref

enum class orb5x::NSelGBref

strong

Magnetic-field value used to normalize energetic distributions.

Enumerator
G_B0	Reference/on-axis field.
G_BMIN	Minimum field on the selected surface.
G_BMAX	Maximum field on the selected surface.

◆ NSelGetField

enum class orb5x::NSelGetField

strong

Grid-to-particle field-interpolation kernel organization.

Enumerator
GET_FIELD_BY_PART	Parallelize directly over markers.
GET_FIELD_BY_CELL	Parallelize over sorted spatial cells.

◆ NSelGradp

enum class orb5x::NSelGradp

strong

Pressure-gradient discretization.

Enumerator
GRAD_POL	Standard polarization pressure gradient.
GRAD_POL_CORR	Corrected polarization pressure gradient.

◆ NSelGyr

enum class orb5x::NSelGyr

strong

Gyroaveraging-point selection strategy.

Enumerator
ADAPT	Adapt points to gyroradius with a fixed four-point scale.
FIXED	Use exactly navg points.
DK	Drift-kinetic approximation without gyroaveraging.
ADAPT_NAVG	Adapt points using pi*navg as the scale.

◆ NSelHeatsourceRadial

enum class orb5x::NSelHeatsourceRadial

strong

Source of the radial heat-deposition profile.

Enumerator
RADIAL_CODE	Evaluate the built-in analytic profile.
RADIAL_FILE	Interpolate a profile from file.

◆ NSelHybridModel

enum class orb5x::NSelHybridModel

strong

Kinetic trapped/passing hybrid model.

Enumerator
NO_HYBRID_MODEL	Deposit all kinetic marker response normally.
HYBRID_MODEL_UPGRADE	Upgraded Idomura-style hybrid model.
STANDARD_HYBRID_MODEL	Standard model depositing trapped-particle charge only.

◆ NSelInitPert

enum class orb5x::NSelInitPert

strong

Initial marker-weight or potential perturbation.

Enumerator
PERT_NOISE	Uniform low-amplitude weight perturbation.
PERT_MODE_UNCORRECTED	Uncorrected Gaussian (m,n) spectrum.
PERT_MODE	Corrected Gaussian (m,n) spectrum.
PERT_MODE_TAE	Toroidal-Alfven-eigenmode Gaussian perturbation.
PERT_MODE_SAW	Shear-Alfven-wave perturbation.
PERT_D_COS	Density perturbation proportional to cos(chi).
PERT_D_SIN	Density perturbation proportional to sin(chi).
PERT_RH_COS	Rosenbluth-Hinton cosine perturbation.
PERT_RH_SIN	Rosenbluth-Hinton sine perturbation.
PERT_RH_SIN_B	Magnetic-field-weighted RH sine perturbation.
PERT_TANH_SIN	GAM perturbation proportional to tanh(r) sin(chi).
PERT_GENE	GENE-compatible spatial perturbation.
PERT_GENE_VPLL	GENE-compatible perturbation with v_parallel dependence.
PERT_POTENTIAL	Initialize electrostatic potential directly.
PERT_RH_VPLL	RH sinusoid with parallel-velocity dependence.
PERT_COLL_II_1	Ion-ion collision verification case 1.
PERT_COLL_II_2	Ion-ion collision verification case 2.
PERT_COLL_II_3	Ion-ion collision verification case 3.
PERT_COLL_II_4	Ion-ion collision verification case 4.
PERT_SINGLEPART	Perturb a single test marker.
PERT_LIGKA5	LIGKA-L5 prescribed perturbation.
PERT_LIGKA5_AUTO	Automatically parameterized LIGKA-L5 perturbation.
PERT_GAUSS_LIST	Sum a configured list of Gaussian perturbations.

◆ NSelInnerBc

enum class orb5x::NSelInnerBc

strong

Boundary condition at the magnetic axis.

Enumerator
NO_INNER_BC	Do not impose an explicit axis condition.
DIRICHLET_INNER_BC	Impose a Dirichlet value at the axis.
UNICITY_INNER_BC	Enforce single-valuedness at the axis.

◆ NSelIonValues

enum class orb5x::NSelIonValues

strong

Input quantities from which main-ion normalization is inferred.

Enumerator
ION_VALUES_ORB5	Preserve legacy ORB5 inference rules.
ION_VALUES_TAU_FPART	Infer from temperature ratio and dilution.
ION_VALUES_TAU_N	Infer from temperature ratio and density.
ION_VALUES_T_N	Infer from physical temperature and density.
ION_VALUES_T_FPART	Infer from physical temperature and dilution.

◆ NSelLoadphi

enum class orb5x::NSelLoadphi

strong

Toroidal-angle marker-loading sequence.

Enumerator
UNIFORM	Uniform midpoint sequence.
HAMMERSLEY	Low-discrepancy Hammersley sequence.

◆ NSelLoadSpace

enum class orb5x::NSelLoadSpace

strong

Electron configuration-space loading density.

Enumerator
SPACE_GAUSSIAN	Gaussian/constant mixed radial loading.
SPACE_ALPHAB	Loading proportional to geometric alpha_b(s,chi).

◆ NSelLoadV

enum class orb5x::NSelLoadV

strong

Velocity-space marker-loading density.

Enumerator
LOAD_V2	Uniform sampling in squared speed.
LOAD_V3	Uniform sampling in cubed speed.
LOAD_V2_NO_T	Squared-speed sampling without local-temperature scaling.

◆ NSelMatrixType

enum class orb5x::NSelMatrixType

strong

Enumerator
NSEL_GBMAT
NSEL_PBMAT

◆ NSelNoiseFilter

enum class orb5x::NSelNoiseFilter

strong

Phase relation of the deposition noise-filter stencil.

Enumerator
SHIFTED	Use the shifted stencil.
ANTI_ALIGNED	Use the anti-aligned stencil.

◆ NSelNormalizeDensity

enum class orb5x::NSelNormalizeDensity

strong

Volume convention used to normalize species density.

Enumerator
ANNUAR	Normalize with the simulated annular volume.
FULL	Normalize with the full torus volume.
FREE	Preserve the supplied normalization.
TAE	Use the TAE benchmark normalization convention.

◆ NSelPoisson

enum class orb5x::NSelPoisson

strong

Gyrokinetic polarization model in quasineutrality.

Enumerator
LWA	Long-wavelength approximation.
ARBITRARY	Arbitrary-wavelength gyrokinetic polarization.
PADE	Pade approximation to finite-Larmor-radius polarization.

◆ NSelPotProfile

enum class orb5x::NSelPotProfile

strong

Prescribed background-potential radial profile.

Enumerator
NO_POT	No prescribed potential.
POT_BEN	Built-in Ben profile.
POT_SHEAR	Analytic sheared-flow profile.
POT_PROF_FILE	Interpolate the potential from a profile file.
POT_OGYROPSI	Legacy ORB5/GYROPSI profile.
POT_JAMIE	Built-in Jamie profile.
POT_VPROF	Derive potential from the velocity profile.

◆ NSelProfile

enum class orb5x::NSelProfile

strong

Family of radial equilibrium density/temperature/flow profiles.

Enumerator
TYPE_1	Analytic profile in normalized poloidal flux.
TYPE_2	Legacy LORB5 profile in minor radius.
TYPE_22	Global/local profile in squared minor radius.
TYPE_3	First Cyclone benchmark profile.
TYPE_4	Windowed Cyclone benchmark profile.
INTERP_ITM	Interpolate an ITM/IMAS experimental profile.
INTERP_TRANSP	Interpolate a TRANSP profile file.
TYPE_7	Flat-gradient MHD profile.
TYPE_8	Solovev-equilibrium flux profile.
TYPE_9	Exponential core, linear pedestal, constant SOL.
TYPE_10	Parabolic deep core plus type-9 edge profile.

◆ NSelPszs

enum class orb5x::NSelPszs

strong

Phase-space zonal-structure execution mode.

Enumerator
PSZS_OFF	Disable PSZS processing.
PSZS_ONLINE	Accumulate PSZS during the simulation.
PSZS_OFFLINE	Prepare/read data for offline PSZS processing.

◆ NSelPszsType

enum class orb5x::NSelPszsType

strong

Distribution quantity projected by PSZS.

Enumerator
PSZS_W	Perturbed marker-weight contribution.
PSZS_F0	Equilibrium-distribution contribution.

◆ NSelPtransp

enum class orb5x::NSelPtransp

strong

Particle transport between toroidal spatial domains.

Enumerator
PTRANSP_SERIAL	Use serialized neighbor exchange.
PTRANSP_PARALLEL	Use the parallel exchange path.

◆ NSelPullback

enum class orb5x::NSelPullback

strong

Electromagnetic pullback formulation.

Enumerator
NO_PULLBACK	Disable pullback mitigation.
PULLBACK_DA_DT_0	Pull back using the initial dA_parallel/dt split.
PULLBACK_OHM	Pull back using the Ohm-law split.

◆ NSelPush

enum class orb5x::NSelPush

strong

Marker trajectory, weight, and deposition evolution mode.

Enumerator
PUSH_FULL	Perturbed trajectories with weight evolution and deposition.
NO_PUSH	Freeze trajectories and weights.
PUSH_UNPERT	Unperturbed trajectories with weight evolution.
PUSH_FULL_TEST	Perturbed test trajectories without weights/deposition.
PUSH_UNPERT_TEST	Unperturbed test trajectories without weights/deposition.

◆ NSelQProfile

enum class orb5x::NSelQProfile

strong

Source of the equilibrium safety-factor profile.

Enumerator
INTERP	Interpolate the loaded equilibrium profile.
QUADRATIC	Use the analytic profile fixed by q0 and qedge.
QCOEF	Evaluate the coefficient-based analytic profile.

◆ NSelQuasineutral

enum class orb5x::NSelQuasineutral

strong

Quasineutral-density closure imposed during normalization.

Enumerator
QN_FREE	Keep all input densities unchanged.
QN_SET_NE	Adjust electron density for quasineutrality.
QN_SET_N1	Adjust the first species density.
QN_SET_NL	Adjust the last species density.

◆ NSelSetrho

enum class orb5x::NSelSetrho

strong

Particle-to-grid charge-deposition kernel organization.

Enumerator
SETRHO_BY_PART	Parallelize directly over markers.
SETRHO_BY_CELL	Parallelize over spatial cells.
SETRHO_BY_COLOR	Use conflict-free cell coloring.
SETRHO_BY_COLOR_BUF	Use coloring with a buffered accumulator.

◆ NSelSolve

enum class orb5x::NSelSolve

strong

Field-system right-hand side/solve operation.

Enumerator
POISSON	Quasineutrality/polarization equation.
AMPERE	Parallel Ampere equation.
DENS1	First density-response system.
MOM	Moment system.

◆ NSelSolverMatrixType

enum class orb5x::NSelSolverMatrixType

strong

Storage format of the radial solver matrix.

Enumerator
GBMAT	General band matrix.
PBMAT	Periodic band matrix.

◆ NSelSortCache

enum class orb5x::NSelSortCache

strong

Guiding-centre sorting for memory locality.

Enumerator
SORT_CACHE_OFF	Preserve marker order.
SORT_CACHE_ON	Periodically reorder markers by spatial bin.

◆ NSelSourceDiagnostics

enum class orb5x::NSelSourceDiagnostics

strong

Source family represented by source-control diagnostics.

Enumerator
NC	Noise-control/Krook source.
HEATING	Heating source.
BUFFER	Outer-buffer source.

◆ NSelStrong

enum class orb5x::NSelStrong

strong

Analytic strong-form test field.

Enumerator
STRONG_EXPECTED	Evaluate the expected physical strong form.
STRONG_UE2_S2	Quadratic radial electric-energy test.
STRONG_UE2_SIN2_CHI	Poloidal squared-sine electric-energy test.
STRONG_UE2_S2_SIN2_CHI	Combined radial/poloidal electric-energy test.
STRONG_UEPHI_SIN2_CHI	Toroidal-electric-field poloidal test.

◆ NSelTestpart

enum class orb5x::NSelTestpart

strong

Test-particle initialization and selection policy.

Enumerator
NO_TESTPART	Disable test-particle output.
READ_TESTPART	Read explicit initial test-particle states.
FIRSTS_TESTPART	Track the first configured markers.

◆ NSelTilt

enum class orb5x::NSelTilt

strong

Gyroangle rotation applied to gyroaveraging points.

Enumerator
NO_TILT	Use the deterministic base gyroangle.
RANDOM_TILT	Apply a random gyroangle offset per marker.

◆ NSelTimeIntegrator

enum class orb5x::NSelTimeIntegrator

strong

Global time-integration scheme.

Enumerator
RK4	Explicit classical fourth-order Runge-Kutta.
GL4	Implicit two-stage fourth-order Gauss-Legendre.

◆ NSelVparallelI

enum class orb5x::NSelVparallelI

strong

Model used for the equilibrium ion parallel velocity.

Enumerator
MHD	Parallel velocity consistent with the MHD equilibrium.
ADHOC	User-prescribed analytic parallel velocity.

◆ NSelVparConstantInF0

enum class orb5x::NSelVparConstantInF0

strong

Prescription for the parallel invariant used in df0/dt.

Enumerator
DH0	Infer dv_parallel from the equilibrium Hamiltonian derivative.
DVPAR1	Use the first-order parallel acceleration directly.
NO_F0_CONSTANT	Keep the baseline dv_parallel without a constraint.
DH0_CORR	Correct Hamiltonian-derived acceleration to match first order.
DVPAR1_CORR	Correct first-order acceleration to conserve the Hamiltonian.

◆ NSelWhichAttribute

enum class orb5x::NSelWhichAttribute

strong

Particle attribute deposited into a field right-hand side.

Enumerator
CHARGE	Charge density.
CURRENT	Parallel current density.

◆ NSelWhichMat

enum class orb5x::NSelWhichMat

strong

Algebraic transform requested from a solver matrix.

Enumerator
T	Matrix itself.
T_TRANSP	Matrix transpose.
T_INV	Matrix inverse/solve operator.

◆ ParallelMomentum

enum class orb5x::ParallelMomentum

strong

Parallel phase-space momentum coordinate.

Enumerator
P_PARALLEL	Canonical parallel momentum.
V_PARALLEL	Kinetic parallel velocity.
MIXED	Mixed-variable pullback momentum.

◆ ParallelMomentumType

enum class orb5x::ParallelMomentumType

strong

Enumerator
P_PARALLEL
V_PARALLEL
MIXED

Function Documentation

◆ allocate_matrix()

void orb5x::allocate_matrix	(	int	globalk,
		int	matnum,
		int	kl,
		int	ku,
		int	n )

◆ backsolve_rhs_f()

void orb5x::backsolve_rhs_f	(	Kokkos::View< Complex * > &	rhs_f,
		int	globalk,
		int	matnum )

◆ bsolve()

void orb5x::bsolve	(	const Zbmat &	mat,
		Complex *	rhs,
		int	nrhs = 1 )

◆ bspl2fft_2d()

void orb5x::bspl2fft_2d	(	const Kokkos::View< Real ** > &	bspl_data,
		Kokkos::View< Complex ** > &	fft_data,
		int	nchi,
		int	nphi )

inline

References orb5x::FFTWrapper::bspl2fft_2d().

◆ bspl2fft_3d()

void orb5x::bspl2fft_3d	(	const Kokkos::View< Real *** > &	bspl_data,
		Kokkos::View< Complex ** > &	fft_data,
		int	ns,
		int	nchi,
		int	nphi,
		int	neq_f,
		const Kokkos::View< int *** > *	filter = nullptr,
		const Kokkos::View< Real * > *	fftminv = nullptr,
		const Kokkos::View< int ** > *	mmin_f = nullptr,
		const Kokkos::View< int ** > *	mmax_f = nullptr )

inline

References orb5x::FFTWrapper::bspl2fft_3d().

◆ cleanup_globals()

void orb5x::cleanup_globals ( )

Release modules and all Kokkos-owning global state.

Precondition: No outstanding kernel or MPI operation references a global view.

Postcondition: Global pointers are null and Kokkos may be finalized.

◆ defmat_disp()

void orb5x::defmat_disp ( )

◆ destroy_plan()

void orb5x::destroy_plan ( fftw_plan plan )

inline

References orb5x::FFTWrapper::destroy_plan().

◆ execute_backward()

void orb5x::execute_backward ( fftw_plan plan )

inline

References orb5x::FFTWrapper::execute_backward().

◆ execute_forward()

void orb5x::execute_forward ( fftw_plan plan )

inline

References orb5x::FFTWrapper::execute_forward().

◆ factorize_matrix()

void orb5x::factorize_matrix	(	Zbmat &	mat,
		int	nmat = -1,
		int	matnum = -1,
		const char *	context = "" )

◆ fft2bspl_2d()

void orb5x::fft2bspl_2d	(	const Kokkos::View< Complex ** > &	fft_data,
		Kokkos::View< Real ** > &	bspl_data,
		int	nchi,
		int	nphi )

inline

References orb5x::FFTWrapper::fft2bspl_2d().

◆ fft2bspl_3d()

void orb5x::fft2bspl_3d	(	const Kokkos::View< Complex ** > &	fft_data,
		Kokkos::View< Real *** > &	bspl_data,
		int	ns,
		int	nchi,
		int	nphi,
		int	neq_f,
		const Kokkos::View< int ** > *	mmin_f = nullptr,
		const Kokkos::View< int ** > *	mmax_f = nullptr )

inline

References orb5x::FFTWrapper::fft2bspl_3d().

◆ fftw_cleanup()

void orb5x::fftw_cleanup ( )

inline

◆ get_matrix()

Zbmat * orb5x::get_matrix	(	int	globalk,
		int	matnum )

◆ IMA()

Complex orb5x::IMA	(	0.	0,
		1.	0 )

constexpr

Imaginary unit used by Fourier-space operations.

◆ init_1d_backward()

void orb5x::init_1d_backward	(	int	n,
		fftw_plan &	plan_backward,
		fftw_complex *	in,
		fftw_complex *	out )

inline

References orb5x::FFTWrapper::init_1d_backward().

◆ init_1d_forward()

void orb5x::init_1d_forward	(	int	n,
		fftw_plan &	plan_forward,
		fftw_complex *	in,
		fftw_complex *	out )

inline

References orb5x::FFTWrapper::init_1d_forward().

◆ init_2d_backward()

void orb5x::init_2d_backward	(	int	nchi,
		int	nphi,
		fftw_plan &	plan_backward,
		fftw_complex *	in,
		fftw_complex *	out )

inline

References orb5x::FFTWrapper::init_2d_backward().

◆ init_2d_forward()

void orb5x::init_2d_forward	(	int	nchi,
		int	nphi,
		fftw_plan &	plan_forward,
		fftw_complex *	in,
		fftw_complex *	out )

inline

References orb5x::FFTWrapper::init_2d_forward().

◆ init_globals()

void orb5x::init_globals ( )

Allocate process-wide state after Kokkos::initialize().

Postcondition: Global state and module pointers declared here are non-null.

◆ init_solver_data()

void orb5x::init_solver_data ( )

◆ interpos_smooth()

void orb5x::interpos_smooth	(	const std::vector< Real > &	xin,
		const std::vector< Real > &	yin,
		std::vector< Real > &	yout,
		std::vector< Real > &	youtp )

◆ printmat()

void orb5x::printmat ( )

◆ set_global_variables()

void orb5x::set_global_variables ( )

Derive cached selectors, species ratios, and auxiliary dimensions.

Precondition: Input is loaded and per-species storage is allocated.

◆ setmat()

void orb5x::setmat ( bool lapl_boundary_terms )

◆ updtmat()

void orb5x::updtmat	(	Zbmat &	mat,
		int	row,
		int	col,
		Complex	val )

◆ vmx()

void orb5x::vmx	(	const Zbmat &	mat,
		const Kokkos::View< Complex * > &	x,
		Kokkos::View< Complex * > &	y )

Variable Documentation

◆ ABSDF_DIA

int orb5x::ABSDF_DIA = 2

constexpr

Phase-space integral of absolute delta f.

◆ ABSDF_IN_DIA

int orb5x::ABSDF_IN_DIA = 10

constexpr

Absolute delta f inside the diagnostic volume.

◆ ABSDF_OUT_DIA

int orb5x::ABSDF_OUT_DIA = 13

constexpr

Absolute delta f outside the diagnostic volume.

◆ ABSG_DIA

int orb5x::ABSG_DIA = 22

constexpr

Sum of absolute marker sampling distribution g.

◆ ABSPWEIGHT_DIA

int orb5x::ABSPWEIGHT_DIA = 17

constexpr

Sum of absolute second/background weights.

◆ ALP_PIC

int orb5x::ALP_PIC = 2

constexpr

Marker loading/Jacobian factor alpha slot.

◆ antenna

AntennaVariables* orb5x::antenna

extern

Externally imposed antenna configuration.

◆ APA_2D_DIA

int orb5x::APA_2D_DIA = 2

constexpr

Global parallel-vector-potential spectrum.

◆ APA_2D_LOC_DIA

int orb5x::APA_2D_LOC_DIA = 3

constexpr

Radially local parallel-vector-potential spectrum.

◆ basic

BasicVariables* orb5x::basic

extern

Run-control and top-level input state.

◆ BUFFER_DENS_DIA

int orb5x::BUFFER_DENS_DIA = 8

constexpr

Buffer density contribution.

◆ BUFFER_ENERGY_DIA

int orb5x::BUFFER_ENERGY_DIA = 9

constexpr

Buffer energy contribution.

◆ BUFFER_VPLL_DIA

int orb5x::BUFFER_VPLL_DIA = 11

constexpr

Buffer parallel-momentum contribution.

◆ BUFFER_ZF_DIA

int orb5x::BUFFER_ZF_DIA = 10

constexpr

Buffer zonal-flow contribution.

◆ CGRAINED_PIC

int orb5x::CGRAINED_PIC = 6

constexpr

Coarse-grained marker-state flag slot.

◆ CHI_DIA

int orb5x::CHI_DIA = 1

constexpr

Poloidal-angle displacement component.

◆ CHI_PIC

int orb5x::CHI_PIC = 1

constexpr

Poloidal-angle slot in primary marker storage, radians.

◆ cke

int orb5x::cke = 0

constexpr

PSZS kinetic-energy coordinate slot.

◆ CLIGHT

Real orb5x::CLIGHT = 2.9979E8

constexpr

Speed of light in metres per second.

◆ cmu

int orb5x::cmu = 2

constexpr

PSZS magnetic-moment coordinate slot.

◆ collisions

CollisionsVariables* orb5x::collisions

extern

Collision-operator configuration.

◆ ctam

int orb5x::ctam = 1

constexpr

PSZS toroidal-angular-momentum coordinate slot.

◆ CUR_2D_DIA

int orb5x::CUR_2D_DIA = 6

constexpr

Global parallel-current spectrum.

◆ CUR_2D_LOC_DIA

int orb5x::CUR_2D_LOC_DIA = 7

constexpr

Local parallel-current spectrum.

◆ CURV_DIA

int orb5x::CURV_DIA = 3

constexpr

Magnetic-curvature drift contribution.

◆ DENS_WT_PIC

int orb5x::DENS_WT_PIC = 2

constexpr

Density-weight slot in deposition workspace.

◆ DENSITY_LOSSES

int orb5x::DENSITY_LOSSES = 0

constexpr

Lost represented particle number.

◆ DF_AV_2D_DIA

int orb5x::DF_AV_2D_DIA = 0

constexpr

Two-dimensional average of delta f.

◆ DF_VEL_2D_DIA

int orb5x::DF_VEL_2D_DIA = 1

constexpr

delta f on the two-dimensional velocity grid.

◆ DFSUM_3_DIA

int orb5x::DFSUM_3_DIA = 5

constexpr

Cubic signed delta f sum.

◆ DFSUM_4_DIA

int orb5x::DFSUM_4_DIA = 6

constexpr

Quartic delta f sum.

◆ diag

DiagVariables* orb5x::diag

extern

User-facing diagnostic configuration and counters.

◆ diagnostics

DiagnosticsVariables* orb5x::diagnostics

extern

Derived diagnostic work arrays.

◆ DN_PIC

int orb5x::DN_PIC = 2

constexpr

Density increment slot.

◆ DOTPZAPA_DIA

int orb5x::DOTPZAPA_DIA = 7

constexpr

Time-derivative p_z A_parallel contribution.

◆ DV2_PIC

int orb5x::DV2_PIC = 1

constexpr

Squared-speed/energy increment slot.

◆ DVPAR_PIC

int orb5x::DVPAR_PIC = 0

constexpr

Parallel-momentum increment slot.

◆ EBG_DIA

int orb5x::EBG_DIA = 5

constexpr

Background-electric-field contribution.

◆ ECHARGE

Real orb5x::ECHARGE = 1.6021765E-19

constexpr

Elementary charge magnitude in coulombs.

◆ EF1_2D_DIA

int orb5x::EF1_2D_DIA = 0

constexpr

Global first electric-field spectrum.

◆ EF1_2D_LOC_DIA

int orb5x::EF1_2D_LOC_DIA = 1

constexpr

Local first electric-field spectrum.

◆ EF2_2D_DIA

int orb5x::EF2_2D_DIA = 4

constexpr

Global second electric-field spectrum.

◆ EF2_2D_LOC_DIA

int orb5x::EF2_2D_LOC_DIA = 5

constexpr

Local second electric-field spectrum.

◆ EFLUXF0H_DIA

int orb5x::EFLUXF0H_DIA = 0

constexpr

f0 radial heat flux in helical cells.

◆ EFLUXF0ISL_DIA

int orb5x::EFLUXF0ISL_DIA = 0

constexpr

f0-weighted energy flux along perturbed magnetic field.

◆ EFLUXF0ISLH_DIA

int orb5x::EFLUXF0ISLH_DIA = 2

constexpr

f0 heat flux along perturbed field in helical cells.

◆ EFLUXWH_DIA

int orb5x::EFLUXWH_DIA = 1

constexpr

delta f radial heat flux in helical cells.

◆ EFLUXWISL_DIA

int orb5x::EFLUXWISL_DIA = 1

constexpr

delta f-weighted energy flux along perturbed magnetic field.

◆ EFLUXWISLH_DIA

int orb5x::EFLUXWISLH_DIA = 3

constexpr

delta f heat flux along perturbed field in helical cells.

◆ EKINF0_DIA

int orb5x::EKINF0_DIA = 9

constexpr

Equilibrium-distribution kinetic energy.

◆ EKINF0_TR_DIA

int orb5x::EKINF0_TR_DIA = 16

constexpr

Trapped-particle equilibrium kinetic energy.

◆ ENERGY_LOSSES

int orb5x::ENERGY_LOSSES = 1

constexpr

Lost kinetic energy.

◆ ENTROPY_DIA

int orb5x::ENTROPY_DIA = 4

constexpr

Perturbed entropy measure.

◆ ENTROPY_IN_DIA

int orb5x::ENTROPY_IN_DIA = 12

constexpr

Entropy inside the diagnostic volume.

◆ ENTROPY_OUT_DIA

int orb5x::ENTROPY_OUT_DIA = 15

constexpr

Entropy outside the diagnostic volume.

◆ EPSILONO

Real orb5x::EPSILONO = 8.8541878E-12

constexpr

Vacuum permittivity in farads per metre.

◆ equil

EquilVariables* orb5x::equil

extern

Magnetic-equilibrium and normalization state.

◆ ETA_DIA

int orb5x::ETA_DIA = 4

constexpr

Second nonsingular axis-coordinate displacement.

◆ ETRANSF0_DIA

int orb5x::ETRANSF0_DIA = 1

constexpr

Field-to-particle energy transfer weighted by f0.

◆ ETRANSW_DIA

int orb5x::ETRANSW_DIA = 0

constexpr

Field-to-particle energy transfer weighted by delta f.

◆ EULER

Real orb5x::EULER = 0.5772156649015328606065120900824024310422

constexpr

Euler-Mascheroni constant.

◆ EXB_DIA

int orb5x::EXB_DIA = 6

constexpr

ExB drift contribution.

◆ EXBTOR_DIA

int orb5x::EXBTOR_DIA = 5

constexpr

Toroidal ExB flow.

◆ F_AV_2D_DIA

int orb5x::F_AV_2D_DIA = 2

constexpr

Distribution zeroth moment.

◆ F_AVH_DIA

int orb5x::F_AVH_DIA = 7

constexpr

Helically binned distribution zeroth moment.

◆ F_DIA

int orb5x::F_DIA = 3

constexpr

Distribution/density zeroth moment.

◆ F_MS_DIA

int orb5x::F_MS_DIA = 8

constexpr

Square of the mean distribution/density.

◆ F_P_DIA

int orb5x::F_P_DIA = 9

constexpr

Passing-particle distribution zeroth moment.

◆ F_TH_DIA

int orb5x::F_TH_DIA = 3

constexpr

Poloidally binned distribution zeroth moment.

◆ F_TR_DIA

int orb5x::F_TR_DIA = 13

constexpr

Trapped-particle distribution zeroth moment.

◆ F_VEL_2D_DIA

int orb5x::F_VEL_2D_DIA = 2

constexpr

Total distribution on the velocity grid.

◆ FFINIT_PIC

int orb5x::FFINIT_PIC = 3

constexpr

Initial equilibrium-distribution value slot.

◆ FFINIT_PVOL_PIC

int orb5x::FFINIT_PVOL_PIC = 0

constexpr

Initial f0 times marker phase volume.

◆ FIELD_CORR_DIA

int orb5x::FIELD_CORR_DIA = 3

constexpr

Corrected field contribution.

◆ FIELD_DIA

int orb5x::FIELD_DIA = 1

constexpr

Field contribution to fluctuation entropy.

◆ fields

FieldsVariables* orb5x::fields

extern

Field-grid, filtering, and model state.

Referenced by orb5x::ParticleModule::init_distrib_2D_loadRZ().

◆ fields_module

FieldsModule* orb5x::fields_module

extern

Field deposition and solve service.

Referenced by orb5x::AntennaModule::init_antenna().

◆ FIXED_POINT_RTOL

Real orb5x::FIXED_POINT_RTOL = 1.0E-15

constexpr

Relative tolerance for fixed-point iteration.

◆ FLUID_1

int orb5x::FLUID_1 = 0

constexpr

First electron-fluid moment slot.

◆ FLUID_2

int orb5x::FLUID_2 = 1

constexpr

Second electron-fluid moment slot.

◆ FLUID_3

int orb5x::FLUID_3 = 2

constexpr

Third electron-fluid moment slot.

◆ FLUID_4

int orb5x::FLUID_4 = 3

constexpr

Fourth electron-fluid moment slot.

◆ FLUID_5

int orb5x::FLUID_5 = 4

constexpr

Fifth electron-fluid moment slot.

◆ FLUID_6

int orb5x::FLUID_6 = 5

constexpr

Sixth electron-fluid moment slot.

◆ FLUID_7

int orb5x::FLUID_7 = 6

constexpr

Seventh electron-fluid moment slot.

◆ FLUX_CORR_DIA

int orb5x::FLUX_CORR_DIA = 4

constexpr

Corrected flux contribution.

◆ FLUX_DIA

int orb5x::FLUX_DIA = 2

constexpr

Flux contribution to fluctuation entropy.

◆ FLUX_WT_PIC

int orb5x::FLUX_WT_PIC = 1

constexpr

Flux-weight slot in deposition workspace.

◆ FR_DETRAP

int orb5x::FR_DETRAP = 3

constexpr

Transition identifier for trapped-to-passing motion.

◆ FR_PASS

int orb5x::FR_PASS = 1

constexpr

Passing-orbit classification identifier.

◆ FR_RETRAP

int orb5x::FR_RETRAP = 4

constexpr

Transition identifier for passing-to-trapped motion.

◆ FR_TRAP

int orb5x::FR_TRAP = 2

constexpr

Trapped-orbit classification identifier.

◆ FRES

const char* orb5x::FRES = "orb5_res.h5"

constexpr

Main results filename.

◆ FRES2

const char* orb5x::FRES2 = "orb5_traj.h5"

constexpr

Test-particle trajectory filename.

◆ fresid

extern::H5::H5File* orb5x::fresid

Owning main-results handle, or nullptr.

◆ fresid2

extern::H5::H5File* orb5x::fresid2

Owning trajectory-file handle, or nullptr.

◆ FSELECT_APA

int orb5x::FSELECT_APA = 3

constexpr

Select parallel vector potential A_parallel.

◆ FSELECT_PHI

int orb5x::FSELECT_PHI = 1

constexpr

Select fluctuating electrostatic potential phi.

◆ FSELECT_PHI0

int orb5x::FSELECT_PHI0 = 2

constexpr

Select axisymmetric/background potential phi0.

◆ FSIG_AV_DIA

int orb5x::FSIG_AV_DIA = 5

constexpr

Time-averaged distribution-function signal.

◆ FSIG_DIA

int orb5x::FSIG_DIA = 4

constexpr

Instantaneous distribution-function signal.

◆ FU2_AV_2D_DIA

int orb5x::FU2_AV_2D_DIA = 4

constexpr

Parallel-velocity second moment.

◆ FU_AV_2D_DIA

int orb5x::FU_AV_2D_DIA = 3

constexpr

Parallel-velocity first moment.

◆ FVP2_AV_2D_DIA

int orb5x::FVP2_AV_2D_DIA = 5

constexpr

Perpendicular-speed second moment.

◆ GL4_A11

Real orb5x::GL4_A11 = 0.25

constexpr

Gauss-Legendre Butcher coefficient a11.

◆ GL4_A12

Real orb5x::GL4_A12 = -0.038675134594812866

constexpr

Gauss-Legendre Butcher coefficient a12.

◆ GL4_A21

Real orb5x::GL4_A21 = 0.53867513459481287

constexpr

Gauss-Legendre Butcher coefficient a21.

◆ GL4_A22

Real orb5x::GL4_A22 = 0.25

constexpr

Gauss-Legendre Butcher coefficient a22.

◆ GL4_C1

Real orb5x::GL4_C1 = 0.21132486540518713

constexpr

First node of two-stage fourth-order Gauss-Legendre integration.

◆ GL4_C2

Real orb5x::GL4_C2 = 0.78867513459481287

constexpr

Second Gauss-Legendre time node.

◆ GRB_DIA

int orb5x::GRB_DIA = 2

constexpr

Grad-B drift contribution.

◆ GRP_DIA

int orb5x::GRP_DIA = 4

constexpr

Pressure-gradient contribution.

◆ GSUM_2_DIA

int orb5x::GSUM_2_DIA = 24

constexpr

Second raw moment of g.

◆ GSUM_3_DIA

int orb5x::GSUM_3_DIA = 25

constexpr

Third raw moment of g.

◆ GSUM_4_DIA

int orb5x::GSUM_4_DIA = 26

constexpr

Fourth raw moment of g.

◆ GSUM_DIA

int orb5x::GSUM_DIA = 23

constexpr

First raw moment of marker sampling distribution g.

◆ HEAT_DIA

int orb5x::HEAT_DIA = 0

constexpr

Total radial heat flux.

◆ HEAT_DIA_NEO

int orb5x::HEAT_DIA_NEO = 3

constexpr

Neoclassical heat-flux component.

◆ HEAT_P_DIA

int orb5x::HEAT_P_DIA = 9

constexpr

Passing-particle heat flux.

◆ HEAT_P_DIA_NEO

int orb5x::HEAT_P_DIA_NEO = 13

constexpr

Neoclassical passing heat flux.

◆ HEAT_TR_DIA

int orb5x::HEAT_TR_DIA = 10

constexpr

Trapped-particle heat flux.

◆ HEAT_TR_DIA_NEO

int orb5x::HEAT_TR_DIA_NEO = 14

constexpr

Neoclassical trapped heat flux.

◆ HEATING_DENS_DIA

int orb5x::HEATING_DENS_DIA = 4

constexpr

Heating-source density contribution.

◆ HEATING_ENERGY_DIA

int orb5x::HEATING_ENERGY_DIA = 5

constexpr

Heating-source energy contribution.

◆ HEATING_VPLL_DIA

int orb5x::HEATING_VPLL_DIA = 7

constexpr

Heating-source parallel-momentum contribution.

◆ HEATING_ZF_DIA

int orb5x::HEATING_ZF_DIA = 6

constexpr

Heating-source zonal-flow contribution.

◆ ID_PIC

int orb5x::ID_PIC = 0

constexpr

Globally persistent marker identifier slot.

◆ ILARM_PIC

int orb5x::ILARM_PIC = 1

constexpr

Offset of the first gyroaveraging point.

◆ INNER_EDGE

int orb5x::INNER_EDGE = 0

constexpr

Inner-radial-boundary loss slot.

◆ INPUT_FILENAME

const char* orb5x::INPUT_FILENAME = "input"

constexpr

Default namelist input filename.

◆ islands

IslandsVariables* orb5x::islands

extern

Prescribed magnetic-island configuration.

◆ JBOOT_DIA

int orb5x::JBOOT_DIA = 6

constexpr

Bootstrap-current moment.

◆ JDOTE_DIA

int orb5x::JDOTE_DIA = 13

constexpr

Species energy transfer j dot E.

◆ KBOLTZ

Real orb5x::KBOLTZ = 1.3806E-23

constexpr

Boltzmann constant in joules per kelvin.

◆ KSI_DIA

int orb5x::KSI_DIA = 3

constexpr

First nonsingular axis-coordinate displacement.

◆ KSIETA_PIC

int orb5x::KSIETA_PIC = 0

constexpr

Low-discrepancy loading-state slot.

◆ LNLAM

Real orb5x::LNLAM = 15.0

constexpr

Reference Coulomb logarithm, dimensionless.

◆ LOSSES_MOMENTS

int orb5x::LOSSES_MOMENTS = 3

constexpr

Number of tracked loss moments.

◆ lu_dat

int orb5x::lu_dat = 99

constexpr

Legacy generic-data unit.

◆ lu_datn

int orb5x::lu_datn = 32

constexpr

Legacy density-data unit.

◆ lu_datv

int orb5x::lu_datv = 100

constexpr

Legacy velocity-data unit.

◆ lu_debug

int orb5x::lu_debug = 13

constexpr

Legacy debug-log unit.

◆ lu_denprofs

int orb5x::lu_denprofs = 89

constexpr

Legacy density-profile unit.

◆ lu_f0

int orb5x::lu_f0 = 90

constexpr

Legacy numerical-f0 unit.

◆ lu_fields

int orb5x::lu_fields = 96

constexpr

Legacy saved-field unit.

◆ lu_input

int orb5x::lu_input = 16

constexpr

Legacy Fortran unit reserved for namelist input.

◆ lu_io

int orb5x::lu_io = 14

constexpr

Legacy general I/O unit.

◆ lu_kprofs

int orb5x::lu_kprofs = 88

constexpr

Legacy gradient-profile unit.

◆ lu_noh5

int orb5x::lu_noh5 = 63

constexpr

Legacy non-HDF5 output unit.

◆ lu_optidat

int orb5x::lu_optidat = 75

constexpr

Legacy optimized-loading data unit.

◆ lu_p1

int orb5x::lu_p1 = 81

constexpr

Legacy first potential-component unit.

◆ lu_p2

int orb5x::lu_p2 = 83

constexpr

Legacy second potential-component unit.

◆ lu_profiles

int orb5x::lu_profiles = 78

constexpr

Legacy equilibrium-profile unit.

◆ lu_profs

int orb5x::lu_profs = 87

constexpr

Legacy species-profile unit.

◆ lu_pszs

int orb5x::lu_pszs = 36

constexpr

Legacy PSZS-output unit.

◆ lu_res

int orb5x::lu_res = 34

constexpr

Legacy results unit.

◆ lu_restime

int orb5x::lu_restime = 35

constexpr

Legacy restart-timing unit.

◆ lu_stop

int orb5x::lu_stop = 31

constexpr

Legacy stop/status-file unit.

◆ lu_test

int orb5x::lu_test = 33

constexpr

Legacy test-output unit.

◆ lu_testpart

int orb5x::lu_testpart = 77

constexpr

Legacy test-particle input unit.

◆ lu_tkdat

int orb5x::lu_tkdat = 97

constexpr

Legacy toolkit-data unit.

◆ lu_tklog

int orb5x::lu_tklog = 98

constexpr

Legacy toolkit-log unit.

◆ lu_traj

int orb5x::lu_traj = 95

constexpr

Legacy trajectory-output unit.

◆ lu_version

int orb5x::lu_version = 15

constexpr

Legacy version-file unit.

◆ MATS

MatArray orb5x::MATS

extern

◆ MAX_PIC2_C

int orb5x::MAX_PIC2_C = 7

constexpr

Auxiliary marker reals with coarse-graining extras.

◆ MAX_PIC2_NC

int orb5x::MAX_PIC2_NC = 5

constexpr

Auxiliary marker reals without coarse-graining extras.

◆ MAX_PIC3

int orb5x::MAX_PIC3 = 2

constexpr

Integer/flag values in tertiary marker storage.

◆ MAX_PIC4

int orb5x::MAX_PIC4 = 1

constexpr

64-bit integer values stored per marker.

◆ MAX_WORK_C

int orb5x::MAX_WORK_C = 6

constexpr

Primary marker reals with the second weight.

◆ MAX_WORK_NC

int orb5x::MAX_WORK_NC = 5

constexpr

Primary marker reals without the second weight.

◆ MEMKSA

Real orb5x::MEMKSA = 9.1094E-31

constexpr

Electron mass in kilograms.

◆ MIMKSA

Real orb5x::MIMKSA = 1.6726231E-27

constexpr

Reference proton/ion mass in kilograms.

◆ moments_3d_size

int orb5x::moments_3d_size = 8

constexpr

Number of standard 3-D moments.

◆ MOMENTUM_DIA

int orb5x::MOMENTUM_DIA = 2

constexpr

Total radial parallel-momentum flux.

◆ MOMENTUM_DIA_NEO

int orb5x::MOMENTUM_DIA_NEO = 5

constexpr

Neoclassical momentum-flux component.

◆ MPR_2D_ID_JDOTE_ES

int orb5x::MPR_2D_ID_JDOTE_ES = 0

constexpr

Electrostatic j dot E transfer.

◆ MPR_2D_ID_JDOTE_ES_S1

int orb5x::MPR_2D_ID_JDOTE_ES_S1 = 1

constexpr

Electrostatic j dot E in the selected radial interval.

◆ MPR_2D_SIZE

int orb5x::MPR_2D_SIZE = 2

constexpr

Number of mode-particle-resonance 2-D quantities.

◆ MU0

Real orb5x::MU0 = 4.0 * PI * 1e-7

constexpr

Vacuum permeability in henries per metre.

◆ MU_PIC

int orb5x::MU_PIC = 0

constexpr

Normalized magnetic-moment slot in auxiliary storage.

◆ N_DF_AV_2D_DIA

int orb5x::N_DF_AV_2D_DIA = 1

constexpr

Marker-count-weighted average of delta f.

◆ N_VEL_2D_DIA

int orb5x::N_VEL_2D_DIA = 0

constexpr

Marker count on the two-dimensional velocity grid.

◆ NBIN_EN

int orb5x::NBIN_EN = 32

constexpr

Default heating energy bins.

◆ NBIN_LAM

int orb5x::NBIN_LAM = 64

constexpr

Default electron pitch lambda bins.

◆ NBIN_MU

int orb5x::NBIN_MU = 128

constexpr

Magnetic-moment bins for bounce-averaged v_parallel/B.

◆ NBIN_PSI0

int orb5x::NBIN_PSI0 = 64

constexpr

Flux bins for bounce-averaged v_parallel/B.

◆ NBIN_R

int orb5x::NBIN_R = 64

constexpr

Default heating radial bins.

◆ NBIN_S

int orb5x::NBIN_S = 32

constexpr

Default electron radial bins.

◆ NBIN_THETA

int orb5x::NBIN_THETA = 64

constexpr

Default electron poloidal-angle bins.

◆ NBIN_XI

int orb5x::NBIN_XI = 64

constexpr

Default electron pitch-cosine xi bins.

◆ NCONTROL_DENS_DIA

int orb5x::NCONTROL_DENS_DIA = 0

constexpr

Noise-control density correction.

◆ NCONTROL_ENERGY_DIA

int orb5x::NCONTROL_ENERGY_DIA = 1

constexpr

Noise-control energy correction.

◆ NCONTROL_VPLL_DIA

int orb5x::NCONTROL_VPLL_DIA = 3

constexpr

Noise-control parallel-momentum correction.

◆ NCONTROL_ZF_DIA

int orb5x::NCONTROL_ZF_DIA = 2

constexpr

Noise-control zonal-flow correction.

◆ ndump

int orb5x::ndump = 12

constexpr

Legacy unit for formatted restart dumps.

◆ ndump_bin_a

int orb5x::ndump_bin_a = 11

constexpr

Legacy unit for binary array dumps.

◆ ndump_bin_p

int orb5x::ndump_bin_p = 10

constexpr

Legacy unit for binary particle dumps.

◆ NLARM_PIC

int orb5x::NLARM_PIC = 0

constexpr

Number of gyroaveraging points in Larmor metadata.

◆ NOISE_AV_DIA

int orb5x::NOISE_AV_DIA = 7

constexpr

Time-averaged particle-noise estimator.

◆ NOISE_DIA

int orb5x::NOISE_DIA = 6

constexpr

Instantaneous particle-noise estimator.

◆ NPTOT_PRE

Int8 orb5x::NPTOT_PRE = 100000000

constexpr

Samples used by adiabatic-density precomputation.

◆ NUMBER_SOURCE_DIAG

int orb5x::NUMBER_SOURCE_DIAG = 12

constexpr

Number of one-dimensional source diagnostics.

◆ NXI

int orb5x::NXI = 8

constexpr

Helical-angle bins in magnetic-island diagnostics.

◆ OMP_ZERO

int orb5x::OMP_ZERO = 0

constexpr

Zero offset used by OpenMP-compatible indexing paths.

◆ OUTER_EDGE

int orb5x::OUTER_EDGE = 1

constexpr

Outer-radial-boundary loss slot.

◆ P_PIC

int orb5x::P_PIC = 5

constexpr

Background/second-weight slot when two weights are enabled.

◆ PAR_DIA

int orb5x::PAR_DIA = 1

constexpr

Parallel-electric-field contribution.

◆ PARAFRES

const char* orb5x::PARAFRES = "orb5_res_parallel.h5"

constexpr

Parallel results filename.

◆ parafresid

extern::H5::H5File* orb5x::parafresid

Owning parallel-results handle, or nullptr.

◆ parallel

ParallelVariables* orb5x::parallel

extern

MPI topology and host-thread state.

◆ parmove_module

ParMove* orb5x::parmove_module

extern

Toroidal particle-exchange service.

◆ part_fields_module

PartFieldsModule * orb5x::part_fields_module

extern

Marker-to-field interpolation service.

◆ PARTICLE_DIA

int orb5x::PARTICLE_DIA = 1

constexpr

Total radial particle flux.

◆ PARTICLE_DIA_NEO

int orb5x::PARTICLE_DIA_NEO = 4

constexpr

Neoclassical particle-flux component.

◆ particle_module

ParticleModule * orb5x::particle_module

extern

Marker loading and push service.

◆ PARTICLE_P_DIA

int orb5x::PARTICLE_P_DIA = 11

constexpr

Passing-particle particle flux.

◆ PARTICLE_P_DIA_NEO

int orb5x::PARTICLE_P_DIA_NEO = 15

constexpr

Neoclassical passing particle flux.

◆ PARTICLE_TR_DIA

int orb5x::PARTICLE_TR_DIA = 12

constexpr

Trapped-particle particle flux.

◆ PARTICLE_TR_DIA_NEO

int orb5x::PARTICLE_TR_DIA_NEO = 16

constexpr

Neoclassical trapped particle flux.

◆ PARTQUANTS_NUMELS

int orb5x::PARTQUANTS_NUMELS = 20

constexpr

Marker quantities written per test-particle record.

◆ PEKIN_DIA

int orb5x::PEKIN_DIA = 7

constexpr

Marker-weighted kinetic energy.

◆ PHASE_DF_DIA

int orb5x::PHASE_DF_DIA = 3

constexpr

Binned delta f.

◆ PHASE_F0_DIA

int orb5x::PHASE_F0_DIA = 5

constexpr

Binned equilibrium distribution.

◆ PHASE_NUMPART_DIA

int orb5x::PHASE_NUMPART_DIA = 0

constexpr

Marker count in each phase-space bin.

◆ PHASE_P_DIA

int orb5x::PHASE_P_DIA = 4

constexpr

Background/second-weight sum.

◆ PHASE_PVOL_DIA

int orb5x::PHASE_PVOL_DIA = 1

constexpr

Phase-space-volume sum.

◆ PHASE_W2_DIA

int orb5x::PHASE_W2_DIA = 6

constexpr

Squared perturbation-weight sum.

◆ PHASE_W_DIA

int orb5x::PHASE_W_DIA = 2

constexpr

Perturbation-weight sum.

◆ PHI_2D_DIA

int orb5x::PHI_2D_DIA = 0

constexpr

Global electrostatic-potential spectrum.

◆ PHI_2D_LOC_DIA

int orb5x::PHI_2D_LOC_DIA = 1

constexpr

Radially local electrostatic-potential spectrum.

◆ PHI_DIA

int orb5x::PHI_DIA = 2

constexpr

Toroidal-angle displacement component.

◆ PHI_PIC

int orb5x::PHI_PIC = 2

constexpr

Toroidal-angle slot in primary marker storage, radians.

◆ PI

Real orb5x::PI = 3.141592653589793238462643383279502884197

constexpr

Circle constant pi.

◆ PIO2

Real orb5x::PIO2 = 1.57079632679489661923132169163975144209858

constexpr

Half pi, radians.

◆ PNUMB_DIA

int orb5x::PNUMB_DIA = 3

constexpr

Total represented particle number.

◆ PNUMB_IN_DIA

int orb5x::PNUMB_IN_DIA = 11

constexpr

Particle number inside the diagnostic volume.

◆ PNUMB_OUT_DIA

int orb5x::PNUMB_OUT_DIA = 14

constexpr

Particle number outside the diagnostic volume.

◆ POLARISATION_TERM_DIVP0

int orb5x::POLARISATION_TERM_DIVP0 = 9

constexpr

Divergence of equilibrium polarization P0.

◆ POLARISATION_TERM_DIVQ0

int orb5x::POLARISATION_TERM_DIVQ0 = 10

constexpr

Divergence of equilibrium polarization flux Q0.

◆ POLARISATION_TERM_P0

int orb5x::POLARISATION_TERM_P0 = 11

constexpr

Equilibrium polarization P0 term.

◆ POLARISATION_TERM_Q0

int orb5x::POLARISATION_TERM_Q0 = 12

constexpr

Equilibrium polarization flux Q0 term.

◆ POLPROD_DIA

int orb5x::POLPROD_DIA = 5

constexpr

Polarization-product moment.

◆ PSI0CORR_PIC

int orb5x::PSI0CORR_PIC = 4

constexpr

Corrected invariant-flux coordinate slot.

◆ pszs

std::vector<PszsVariables>* orb5x::pszs

extern

Per-species phase-space zonal-structure state.

◆ PULLBACK_DIA

int orb5x::PULLBACK_DIA = 8

constexpr

Pullback-transformation contribution.

◆ PVOL_PIC

int orb5x::PVOL_PIC = 1

constexpr

Marker phase-space-volume slot.

◆ PWEIGHTSUM_2_DIA

int orb5x::PWEIGHTSUM_2_DIA = 19

constexpr

Second raw moment of the second weight.

◆ PWEIGHTSUM_3_DIA

int orb5x::PWEIGHTSUM_3_DIA = 20

constexpr

Third raw moment of the second weight.

◆ PWEIGHTSUM_4_DIA

int orb5x::PWEIGHTSUM_4_DIA = 21

constexpr

Fourth raw moment of the second weight.

◆ PWEIGHTSUM_DIA

int orb5x::PWEIGHTSUM_DIA = 18

constexpr

First raw moment of the second weight.

◆ QP_DIA

int orb5x::QP_DIA = 4

constexpr

Parallel heat-flux moment.

◆ REV_ALP

int orb5x::REV_ALP = 6

constexpr

Bit-reversed sequence for loading factor alpha.

◆ REV_ETA

int orb5x::REV_ETA = 1

constexpr

Bit-reversed sequence for the second spatial coordinate.

◆ REV_KSI

int orb5x::REV_KSI = 0

constexpr

Bit-reversed sequence for the first spatial coordinate.

◆ REV_V1

int orb5x::REV_V1 = 2

constexpr

Bit-reversed sequence for the first velocity coordinate.

◆ REV_V2

int orb5x::REV_V2 = 3

constexpr

Bit-reversed sequence for the second velocity coordinate.

◆ REV_V3

int orb5x::REV_V3 = 5

constexpr

Bit-reversed sequence for the third velocity coordinate.

◆ REV_W

int orb5x::REV_W = 4

constexpr

Bit-reversed sequence for marker weights.

◆ RHO_2D_DIA

int orb5x::RHO_2D_DIA = 2

constexpr

Global charge-density spectrum.

◆ RHO_2D_LOC_DIA

int orb5x::RHO_2D_LOC_DIA = 3

constexpr

Local charge-density spectrum.

◆ RHOG_PIC

int orb5x::RHOG_PIC = 2

constexpr

Normalized gyroradius in Larmor metadata.

◆ S_DIA

int orb5x::S_DIA = 0

constexpr

Radial displacement component.

◆ S_PIC

int orb5x::S_PIC = 0

constexpr

Radial-coordinate slot in primary marker storage.

◆ S_PROD_DIA

int orb5x::S_PROD_DIA = 0

constexpr

Entropy-production term.

◆ SAMP_DF_DIA

int orb5x::SAMP_DF_DIA = 3

constexpr

Sampled delta f.

◆ SAMP_F0_DIA

int orb5x::SAMP_F0_DIA = 5

constexpr

Sampled equilibrium distribution.

◆ SAMP_NUMPART_DIA

int orb5x::SAMP_NUMPART_DIA = 0

constexpr

Marker count in each sampling bin.

◆ SAMP_P_DIA

int orb5x::SAMP_P_DIA = 4

constexpr

Summed background/second weight.

◆ SAMP_PVOL_DIA

int orb5x::SAMP_PVOL_DIA = 1

constexpr

Summed marker phase-space volume.

◆ SAMP_W2_DIA

int orb5x::SAMP_W2_DIA = 6

constexpr

Summed squared perturbation weight.

◆ SAMP_W_DIA

int orb5x::SAMP_W_DIA = 2

constexpr

Summed perturbation weight.

◆ SIGNAL_AV_DIA

int orb5x::SIGNAL_AV_DIA = 1

constexpr

Time-averaged total signal estimator.

◆ SIGNAL_DIA

int orb5x::SIGNAL_DIA = 0

constexpr

Instantaneous total signal estimator.

◆ SIGNAL_NONZONAL_AV_DIA

int orb5x::SIGNAL_NONZONAL_AV_DIA = 3

constexpr

Time-averaged nonzonal signal estimator.

◆ SIGNAL_NONZONAL_DIA

int orb5x::SIGNAL_NONZONAL_DIA = 2

constexpr

Instantaneous nonzonal signal estimator.

◆ slope_line

Real orb5x::slope_line = 0.0

constexpr

Slope of the optimized-loading weight-limit line.

◆ solver

SolverVariables* orb5x::solver

extern

Quasineutrality and Ampere solver configuration.

◆ sorting

SortingVariables* orb5x::sorting

extern

Particle binning and sorting configuration.

◆ SOURCE_3D_DN_DIA

int orb5x::SOURCE_3D_DN_DIA = 1

constexpr

Three-dimensional source density rate.

◆ SOURCE_3D_POWER_DIA

int orb5x::SOURCE_3D_POWER_DIA = 0

constexpr

Three-dimensional deposited source power.

◆ species

std::vector<SpeciesVariables>* orb5x::species

extern

Per-species physical and numerical state.

◆ SQRT2

Real orb5x::SQRT2 = 1.41421356237309504880168872420969807856967

constexpr

Square root of two.

◆ SUMF0_DIA

int orb5x::SUMF0_DIA = 8

constexpr

Marker sum of equilibrium distribution.

◆ T2GAUSS

Real orb5x::T2GAUSS = 1.e4

constexpr

Number of gauss per tesla.

◆ thresh

Real orb5x::thresh = 23.0

constexpr

Threshold parameter of optimized marker loading.

◆ TMP_PHI_PIC

int orb5x::TMP_PHI_PIC = 5

constexpr

Temporary toroidal coordinate used by coarse graining.

◆ TOR_MOMENTUM_DIA

int orb5x::TOR_MOMENTUM_DIA = 6

constexpr

Toroidal-momentum flux.

◆ TOR_MOMENTUM_DIA_NEO

int orb5x::TOR_MOMENTUM_DIA_NEO = 7

constexpr

Neoclassical toroidal-momentum flux.

◆ TOR_REYNOLDS_DIA

int orb5x::TOR_REYNOLDS_DIA = 8

constexpr

Toroidal Reynolds-stress contribution.

◆ TOT_DIA

int orb5x::TOT_DIA = 0

constexpr

Total j dot E energy transfer.

◆ TRAP_PIC

int orb5x::TRAP_PIC = 1

constexpr

Trapped/passing classification slot.

◆ TWOPI

Real orb5x::TWOPI = 6.283185307179586476925286766559005768394

constexpr

Full angular period, radians.

◆ U_DIA

int orb5x::U_DIA = 5

constexpr

Parallel-velocity displacement component.

◆ U_PIC

int orb5x::U_PIC = 3

constexpr

Normalized parallel-velocity slot.

◆ UT2_DIA

int orb5x::UT2_DIA = 1

constexpr

Parallel-velocity second moment.

◆ UT2_P_DIA

int orb5x::UT2_P_DIA = 7

constexpr

Passing-particle parallel-velocity second moment.

◆ UT2_TR_DIA

int orb5x::UT2_TR_DIA = 11

constexpr

Trapped-particle parallel-velocity second moment.

◆ UT_DIA

int orb5x::UT_DIA = 0

constexpr

Parallel-velocity first moment.

◆ UT_MS_DIA

int orb5x::UT_MS_DIA = 7

constexpr

Square of the mean parallel velocity.

◆ UT_P_DIA

int orb5x::UT_P_DIA = 6

constexpr

Passing-particle parallel-velocity first moment.

◆ UT_TR_DIA

int orb5x::UT_TR_DIA = 10

constexpr

Trapped-particle parallel-velocity first moment.

◆ UW_PIC

int orb5x::UW_PIC = 3

constexpr

Parallel-velocity-times-weight workspace slot.

◆ V_PAR2_AVH_DIA

int orb5x::V_PAR2_AVH_DIA = 5

constexpr

Helically binned parallel-velocity second moment.

◆ V_PAR2_TH_DIA

int orb5x::V_PAR2_TH_DIA = 1

constexpr

Poloidally binned parallel-speed squared.

◆ V_PAR_AVH_DIA

int orb5x::V_PAR_AVH_DIA = 4

constexpr

Helically binned parallel-velocity first moment.

◆ V_PAR_TH_DIA

int orb5x::V_PAR_TH_DIA = 0

constexpr

Poloidally binned parallel-velocity moment.

◆ V_PERP2_AVH_DIA

int orb5x::V_PERP2_AVH_DIA = 6

constexpr

Helically binned perpendicular-speed second moment.

◆ V_PERP2_TH_DIA

int orb5x::V_PERP2_TH_DIA = 2

constexpr

Poloidally binned perpendicular-speed squared.

◆ vernum

Real orb5x::vernum = 1.0

constexpr

Legacy numeric ORB5X file/version identifier.

◆ VPLL_LOSSES

int orb5x::VPLL_LOSSES = 2

constexpr

Lost parallel momentum.

◆ VPLTOR_DIA

int orb5x::VPLTOR_DIA = 4

constexpr

Toroidal projection of parallel flow.

◆ VPT2_DIA

int orb5x::VPT2_DIA = 2

constexpr

Perpendicular-speed second moment.

◆ VPT2_P_DIA

int orb5x::VPT2_P_DIA = 8

constexpr

Passing-particle perpendicular-speed second moment.

◆ VPT2_TR_DIA

int orb5x::VPT2_TR_DIA = 12

constexpr

Trapped-particle perpendicular-speed second moment.

◆ VPT_PIC

int orb5x::VPT_PIC = 1

constexpr

Normalized perpendicular-speed quantity.

◆ W_AVERAGE

int orb5x::W_AVERAGE = 0

constexpr

Mean marker weight.

◆ W_DIA

int orb5x::W_DIA = 6

constexpr

Marker-weight displacement component.

◆ W_PIC

int orb5x::W_PIC = 4

constexpr

Perturbed-distribution weight slot.

◆ W_VARIANCE

int orb5x::W_VARIANCE = 4

constexpr

Marker-weight variance.

◆ WADI_AVERAGE

int orb5x::WADI_AVERAGE = 2

constexpr

Mean adiabatic marker weight.

◆ WADI_VARIANCE

int orb5x::WADI_VARIANCE = 6

constexpr

Adiabatic-weight variance.

◆ wLimitFrac

Real orb5x::wLimitFrac = 10.0

constexpr

Initial fractional marker-weight limit.

◆ wLimitFracLimit

Real orb5x::wLimitFracLimit = 200.0

constexpr

Maximum fractional marker-weight limit.

◆ WV_AVERAGE

int orb5x::WV_AVERAGE = 1

constexpr

Mean velocity-weighted marker weight.

◆ WV_VARIANCE

int orb5x::WV_VARIANCE = 5

constexpr

Velocity-weighted marker-weight variance.

◆ WVADI_AVERAGE

int orb5x::WVADI_AVERAGE = 3

constexpr

Mean velocity-weighted adiabatic weight.

◆ WVADI_VARIANCE

int orb5x::WVADI_VARIANCE = 7

constexpr

Velocity-weighted adiabatic-weight variance.

Namespaces

Classes

Typedefs

Enumerations

Functions

Variables

Typedef Documentation

◆ Complex

◆ CoordFunc

◆ fftw_complex_type

◆ fftw_plan_type

◆ FieldFunc

◆ Int4

◆ Int8

◆ Real

◆ Real32

◆ Real64

Enumeration Type Documentation

◆ CopyFields

◆ CreateRhs

◆ Diag3d

◆ Diag3dDen

◆ GetPotDisp

◆ NSel3dDiag

◆ NSelAmpere

◆ NSelAntenna

◆ NSelAntennaRadialProfile

◆ NSelBacksolve

◆ NSelBeamType

◆ NSelBsplinesBasis

◆ NSelBufferType

◆ NSelCollisions

◆ NSelControlVariate

◆ NSelDftMethod

◆ NSelEfluid

◆ NSelElectronValues

◆ NSelF0

◆ NSelFilter

◆ NSelFixedSourceType

◆ NSelFixFields

◆ NSelGBref

◆ NSelGetField

◆ NSelGradp

◆ NSelGyr

◆ NSelHeatsourceRadial

◆ NSelHybridModel

◆ NSelInitPert

◆ NSelInnerBc

◆ NSelIonValues

◆ NSelLoadphi

◆ NSelLoadSpace

◆ NSelLoadV

◆ NSelMatrixType

◆ NSelNoiseFilter

◆ NSelNormalizeDensity

◆ NSelPoisson

◆ NSelPotProfile

◆ NSelProfile

◆ NSelPszs

◆ NSelPszsType

◆ NSelPtransp

◆ NSelPullback

◆ NSelPush

◆ NSelQProfile

◆ NSelQuasineutral

◆ NSelSetrho

◆ NSelSolve

◆ NSelSolverMatrixType

◆ NSelSortCache

◆ NSelSourceDiagnostics

◆ NSelStrong

◆ NSelTestpart

◆ NSelTilt

◆ NSelTimeIntegrator

◆ NSelVparallelI

◆ NSelVparConstantInF0

◆ NSelWhichAttribute

◆ NSelWhichMat

◆ ParallelMomentum

◆ ParallelMomentumType